RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754	OR2Y1	Q8NGV0	311 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	PROKR1	Q8TCW9	393 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	FER1L6-AS2	Q96M78	137 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	BARD1	Q99728	777 aa	Known RBP	13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	AP1M1	Q9BXS5	423 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	MFRP	Q9BY79	579 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	ENAM	Q9NRM1	1142 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	AMFR	Q9UKV5	643 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	RIMKLB	Q9ULI2	386 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	PLCL2	Q9UPR0	1127 aa		13.16	□□□□□ -0.3
RNF31-223	ENST00000560754	R3HDM2	Q9Y2K5	976 aa	Known RBP	13.16	□□□□□ -0.3
RNF31-223	ENST00000560754		A0A0J9YY10	115 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	CCDC162P	A2VCL2	907 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	ERI2	A8K979	691 aa	Known RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	MIF4GD	A9UHW6	222 aa	Known RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	KLHL41	O60662	606 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	CNOT3	O75175	753 aa	Known RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	CBX6	O95503	412 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	DDAH2	O95865	285 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	CTSB	P07858	339 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	OR56A5	P0C7T3	313 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	ACVR1	Q04771	509 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	MYBPC3	Q14896	1274 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	BRD3	Q15059	726 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	KYNU	Q16719	465 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	NKAIN1	Q4KMZ8	207 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	PRR30	Q53SZ7	412 aa	Predicted RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	VWA5B1	Q5TIE3	1220 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	MRGPRE	Q86SM8	312 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	TRIM73	Q86UV7	250 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	HOOK3	Q86VS8	718 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	OR13J1	Q8NGT2	312 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	ELMO1	Q92556	727 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	N4BP2L2	Q92802	583 aa	Predicted RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	SNRNP40	Q96DI7	357 aa	Known RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	C19orf60	Q96EN9	201 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	MRFAP1L1	Q96HT8	127 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	ALS2CR12	Q96Q35	445 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	TMEM121	Q9BTD3	319 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	MENT	Q9BUN1	341 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	ZNF552	Q9H707	407 aa	Predicted RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	SLC22A11	Q9NSA0	550 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	PIH1D1	Q9NWS0	290 aa	Known RBP	13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	CDYL	Q9Y232	598 aa		13.15	□□□□□ -0.3
RNF31-223	ENST00000560754	TCRBV7S2A1N4T	A0A589	114 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	OR51F1	A6NGY5	319 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	ZSCAN9	O15535	394 aa	Predicted RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	OR1I1	O60431	355 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	GPC4	O75487	556 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	SUN1	O94901	812 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	IPO7	O95373	1038 aa	Known RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	PEBP1	P30086	187 aa	Known RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	OTX2	P32243	289 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	CDH17	Q12864	832 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	CCDC38	Q502W7	563 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	DNAJC21	Q5F1R6	531 aa	Known RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	NAPRT	Q6XQN6	538 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	PEX26	Q7Z412	305 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	SLC22A15	Q8IZD6	547 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	GALNT16	Q8N428	558 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	ZNF655	Q8N720	491 aa	Predicted RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	UBL4B	Q8N7F7	174 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	OR52K1	Q8NGK4	314 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	HDAC10	Q969S8	669 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	HES6	Q96HZ4	224 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	RANBP9	Q96S59	729 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	CARD6	Q9BX69	1037 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	P4HTM	Q9NXG6	502 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	IFT80	Q9P2H3	777 aa	Predicted RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	DHCR7	Q9UBM7	475 aa	Known RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	SRPK3	Q9UPE1	567 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	B3GNT3	Q9Y2A9	372 aa		13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	TDRKH	Q9Y2W6	561 aa	Known RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	PTRH2	Q9Y3E5	179 aa	Known RBP	13.14	□□□□□ -0.31
RNF31-223	ENST00000560754	HEATR9	A2RTY3	570 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	ISM1	B1AKI9	464 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	PEX12	O00623	359 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	KDM1A	O60341	852 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	SLCO2B1	O94956	709 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	UMOD	P07911	640 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	RNF224	P0DH78	156 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	ADRA1D	P25100	572 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	CCR7	P32248	378 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	FOLR3	P41439	243 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	RAB28	P51157	221 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	ZNF75D	P51815	510 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	MRPL49	Q13405	166 aa	Known RBP	13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	GRB7	Q14451	532 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	DEFB110	Q30KQ9	67 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	C1orf189	Q5VU69	101 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	HIST2H2BC	Q6DN03	193 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	OVCH1	Q7RTY7	1134 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	PPP1R32	Q7Z5V6	425 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	TMEM151B	Q8IW70	566 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	SYCE1	Q8N0S2	351 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	LINC01555	Q8NAE3	123 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	CLEC1A	Q8NC01	280 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	OR4L1	Q8NH43	312 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	PEX13	Q92968	403 aa		13.13	□□□□□ -0.31
RNF31-223	ENST00000560754	ZNF778	Q96MU6	729 aa		13.13	□□□□□ -0.31

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