RNA–Protein interactions for RNA: ENST00000560127.1

RABGGTA-213, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-213ENST00000560127 SLC5A12Q1EHB4 618 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 KDELC1Q6UW63 502 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 GLT6D1Q7Z4J2 308 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 HOOK3Q86VS8 718 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 CEP97Q8IW35 865 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 MAP7D3Q8IWC1 876 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 FAM20CQ8IXL6 584 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 BLOC1S5Q8TDH9 187 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 CHTF18Q8WVB6 975 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 RNF157Q96PX1 679 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 HGH1Q9BTY7 390 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 SLC26A1Q9H2B4 701 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 SOX17Q9H6I2 414 aaPredicted RBP12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 MVB12BQ9H7P6 319 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 MRM3Q9HC36 420 aaKnown RBP12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 IRAK4Q9NWZ3 460 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 SPHK1Q9NYA1 384 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 NENFQ9UMX5 172 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 HEY1Q9Y5J3 304 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 HEATR5BQ9P2D3 2071 aa12.3□□□□□ -0.44
RABGGTA-213ENST00000560127 A0A0A6YYK5 440 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 DYTNA2CJ06 578 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 CLDN14O95500 239 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 PRAMEF1O95521 474 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 CYP1A2P05177 515 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 PDHA2P29803 388 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 SOX11P35716 441 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 PRLHRP49683 370 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 WNT3AP56704 352 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 TPM4P67936 248 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 BOP1Q14137 746 aaKnown RBP12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 RBBP7Q16576 425 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 C3AR1Q16581 482 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 ZNF658BQ4V348 819 aaPredicted RBP12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 TEX44Q53QW1 395 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 UNC5AQ6ZN44 842 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 TTLL10Q6ZVT0 673 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 VSTM4Q8IW00 320 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 SLC25A41Q8N5S1 370 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 ACBD4Q8NC06 268 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 ADAMTS18Q8TE60 1221 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 PSMF1Q92530 271 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 RAPGEF5Q92565 580 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 OLFM3Q96PB7 478 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 TMUB1Q9BVT8 246 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 COG4Q9H9E3 785 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 HACD3Q9P035 362 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 CTSFQ9UBX1 484 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 CAPN11Q9UMQ6 739 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 PLCL2Q9UPR0 1127 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 PKP3Q9Y446 797 aa12.29□□□□□ -0.44
RABGGTA-213ENST00000560127 A0A0J9YY10 115 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 C17orf113A0A1B0GUU1 675 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 A0A1B0GX78 115 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 SLC19A2O60779 497 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 HPP00738 406 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 F10P00742 488 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 PTPN3P26045 913 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 CD151P48509 253 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 SMSP52788 366 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 ART1P52961 327 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 RBPJQ06330 500 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 PDK1Q15118 436 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 NPNTQ6UXI9 565 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 DNAJB8Q8NHS0 232 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 DLG3Q92796 817 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 HAS2Q92819 552 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 TEKT5Q96M29 485 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 ENKD1Q9H0I2 346 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 ZNF160Q9HCG1 818 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 SEMA3GQ9NS98 782 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 EURLQ9NYK6 297 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 PTGFRNQ9P2B2 879 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 FAM153AQ9UHL3 310 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 TINAGQ9UJW2 476 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 CSPG4Q6UVK1 2322 aa12.28□□□□□ -0.44
RABGGTA-213ENST00000560127 HRNRQ86YZ3 2850 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 VSTM2BA6NLU5 285 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 IFRD1O00458 451 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 STX7O15400 261 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 SRP72O76094 671 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 RASAL1O95294 804 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 EPOP01588 193 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 CRYABP02511 175 aaKnown RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 CHRM5P08912 532 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 PIM1P11309 404 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 ESRRAP11474 423 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 CD99P14209 185 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 KDELR1P24390 212 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 CASP6P55212 293 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 CSNK1G2P78368 415 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 ZBED6P86452 979 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 TBX2Q13207 712 aaPredicted RBP12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 SLC1A5Q15758 541 aa12.27□□□□□ -0.45
RABGGTA-213ENST00000560127 SLC9A4Q6AI14 798 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms