RNA–Protein interactions for RNA: ENST00000560098.5

CRTC3-208, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 1 (best) BASIC

Gene CRTC3, Length 1,421 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-208ENST00000560098 ZNF655Q8N720 491 aaPredicted RBP16.78■□□□□ 0.28
CRTC3-208ENST00000560098 OR2Y1Q8NGV0 311 aa16.78■□□□□ 0.28
CRTC3-208ENST00000560098 TXLNGQ9NUQ3 528 aa16.78■□□□□ 0.28
CRTC3-208ENST00000560098 IRAK4Q9NWZ3 460 aa16.78■□□□□ 0.28
CRTC3-208ENST00000560098 AMFRQ9UKV5 643 aa16.78■□□□□ 0.28
CRTC3-208ENST00000560098 SRPK3Q9UPE1 567 aa16.78■□□□□ 0.28
CRTC3-208ENST00000560098 ICE1Q9Y2F5 2266 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 CCDC162PA2VCL2 907 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 ISM1B1AKI9 464 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 KRT86O43790 486 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 KDM1AO60341 852 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 ALPPP05187 535 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 ATXN8OSP0DMR3 200 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 KLF1Q13351 362 aaPredicted RBP16.77■□□□□ 0.27
CRTC3-208ENST00000560098 MYBPC3Q14896 1274 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 KIR2DS3Q14952 304 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 PLEKHN1Q494U1 663 aaPredicted RBP16.77■□□□□ 0.27
CRTC3-208ENST00000560098 NKAIN1Q4KMZ8 207 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 CCDC38Q502W7 563 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 LYPLAL1Q5VWZ2 237 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 PEX26Q7Z412 305 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 LINC00523Q86TU6 105 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 IQCKQ8N0W5 287 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 GALNT16Q8N428 558 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 DNAJC22Q8N4W6 341 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.27
CRTC3-208ENST00000560098 UBL4BQ8N7F7 174 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 PRR7Q8TB68 274 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 PTERQ96BW5 349 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 C19orf60Q96EN9 201 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 TMEM121Q9BTD3 319 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 PLAGL1Q9UM63 463 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 PLCL2Q9UPR0 1127 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 CDYLQ9Y232 598 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 B3GNT3Q9Y2A9 372 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 R3HDM2Q9Y2K5 976 aaKnown RBP16.77■□□□□ 0.27
CRTC3-208ENST00000560098 UNC79Q9P2D8 2635 aa16.77■□□□□ 0.27
CRTC3-208ENST00000560098 KLHL41O60662 606 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 DDAH2O95865 285 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 PEBP1P30086 187 aaKnown RBP16.76■□□□□ 0.27
CRTC3-208ENST00000560098 SLC9A5Q14940 896 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 MRPL14Q6P1L8 145 aaKnown RBP16.76■□□□□ 0.27
CRTC3-208ENST00000560098 IGFL3Q6UXB1 125 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 RAD9BQ6WBX8 426 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 DNAAF3Q8N9W5 541 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 OR52K1Q8NGK4 314 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 SLC35B2Q8TB61 432 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 SNRNP40Q96DI7 357 aaKnown RBP16.76■□□□□ 0.27
CRTC3-208ENST00000560098 NDC1Q9BTX1 674 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 ZNF552Q9H707 407 aaPredicted RBP16.76■□□□□ 0.27
CRTC3-208ENST00000560098 P4HTMQ9NXG6 502 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 IMPACTQ9P2X3 320 aa16.76■□□□□ 0.27
CRTC3-208ENST00000560098 F8W8V4 182 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 OR1I1O60431 355 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 CNOT3O75175 753 aaKnown RBP16.75■□□□□ 0.27
CRTC3-208ENST00000560098 CDH17Q12864 832 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 PPP1R32Q7Z5V6 425 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 ACRBPQ8NEB7 543 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 OR13J1Q8NGT2 312 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 TTC1Q99614 292 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 PACSIN2Q9UNF0 486 aaPredicted RBP16.75■□□□□ 0.27
CRTC3-208ENST00000560098 SEC16AO15027 2179 aa16.75■□□□□ 0.27
CRTC3-208ENST00000560098 A1L4Q6 167 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 HEATR9A2RTY3 570 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 MIF4GDA9UHW6 222 aaKnown RBP16.74■□□□□ 0.27
CRTC3-208ENST00000560098 IPO13O94829 963 aaKnown RBP16.74■□□□□ 0.27
CRTC3-208ENST00000560098 GAS8O95995 478 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 UMODP07911 640 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 PKLRP30613 574 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 RAB28P51157 221 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 CSE1LP55060 971 aaKnown RBP16.74■□□□□ 0.27
CRTC3-208ENST00000560098 SOX8P57073 446 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 FOXL2P58012 376 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 NR6A1Q15406 480 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 CYP2A13Q16696 494 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 DNAJC21Q5F1R6 531 aaKnown RBP16.74■□□□□ 0.27
CRTC3-208ENST00000560098 AFTPHQ6ULP2 937 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 SLC22A15Q8IZD6 547 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 SYCE1Q8N0S2 351 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 CISD2Q8N5K1 135 aaKnown RBP16.74■□□□□ 0.27
CRTC3-208ENST00000560098 TM9SF4Q92544 642 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 HDAC10Q969S8 669 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 ILKAPQ9H0C8 392 aaPredicted RBP16.74■□□□□ 0.27
CRTC3-208ENST00000560098 ASF1BQ9NVP2 202 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 EURLQ9NYK6 297 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 ESPL1Q14674 2120 aa16.74■□□□□ 0.27
CRTC3-208ENST00000560098 TCRBV7S2A1N4TA0A589 114 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 ERI2A8K979 691 aaKnown RBP16.73■□□□□ 0.27
CRTC3-208ENST00000560098 CBX6O95503 412 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 GOT2P00505 430 aaKnown RBP16.73■□□□□ 0.27
CRTC3-208ENST00000560098 MAGP20916 626 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 ALAS2P22557 587 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 HSPA14Q0VDF9 509 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 KIAA1328Q86T90 577 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 TMEM151BQ8IW70 566 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 FAM20CQ8IXL6 584 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 DLG3Q92796 817 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 ATP13A2Q9NQ11 1180 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 SLC22A11Q9NSA0 550 aa16.73■□□□□ 0.27
CRTC3-208ENST00000560098 SLC2A6Q9UGQ3 507 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms