RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MYH7P12883 1935 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 SULT1B1O43704 296 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CTBP1Q13363 440 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 C7orf50Q9BRJ6 194 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRFN1Q9P244 771 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 MYH8P13535 1937 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CXCR6O00574 342 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 SMAD9O15198 467 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A9O60656 530 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 PQBP1O60828 265 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 GABBR2O75899 941 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 AGR2O95994 175 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A6P19224 532 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A1P22309 533 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A4P22310 534 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 RORAP35398 523 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CDK3Q00526 305 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC3A1Q07837 685 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 IQCHQ86VS3 1027 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 APOLD1Q96LR9 279 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A7Q9HAW7 530 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A10Q9HAW8 530 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 UGT1A8Q9HAW9 530 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 USP29Q9HBJ7 922 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 SAMD9Q5K651 1589 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FAM205AQ6ZU69 1335 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 RPP40O75818 363 aaKnown RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 CAP2P40123 477 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 METTL7BQ6UX53 244 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 NXPE1Q8N323 547 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FBXO15Q8NCQ5 510 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 LRTOMTQ8WZ04 291 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 LPGAT1Q92604 370 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TTYH2Q9BSA4 534 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 PDGFDQ9GZP0 370 aaPredicted RBP13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 TNFRSF10DQ9UBN6 386 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 FBXW2Q9UKT8 454 aa13.61□□□□□ -0.23
CSPG4P12-202ENST00000559989 IL3P08700 152 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 RAP2AP10114 183 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF81P51508 661 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SMSP52788 366 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 KLF10Q13118 480 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SEC23AQ15436 765 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 USP49Q70CQ1 688 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CHPT1Q8WUD6 406 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ART4Q93070 314 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CHST7Q9NS84 486 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ERVK-19Q9WJR5 959 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TNS3Q68CZ2 1445 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 A8MXE2 369 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 GRM6O15303 877 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC19A2O60779 497 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CLN5O75503 358 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 RBMXP38159 391 aaKnown RBP13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 MARCH9Q86YJ5 346 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CPA6Q8N4T0 437 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CORO1BQ9BR76 489 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC30A2Q9BRI3 323 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 KIAA0556O60303 1618 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 VILLO15195 856 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ATG12O94817 140 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 PLATP00750 562 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 BPGMP07738 259 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF35P13682 527 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 HDCP19113 662 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TAS2R43P59537 309 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 RRAS2P62070 204 aaPredicted RBP13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CHRFAM7AQ494W8 412 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TPRG1LQ5T0D9 272 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TSEN2Q8NCE0 465 aaKnown RBP13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ITPAQ9BY32 194 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 RHOJQ9H4E5 214 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TMEM185BQ9H7F4 350 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CENPMQ9NSP4 180 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 USP6P35125 1406 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 GRIN3BO60391 1043 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 PEX14O75381 377 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TBC1D16Q8TBP0 767 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SLC41A3Q96GZ6 507 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 EPYCQ99645 322 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 KCNU1A8MYU2 1149 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SHOXO15266 292 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CLEC3AO75596 197 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ARL6IP5O75915 188 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 LINC00471Q8N535 108 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TMEM100Q9NV29 134 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 TMED5Q9Y3A6 229 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 MRPL42Q9Y6G3 142 aaKnown RBP13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 C2orf74A8MZ97 194 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 BUD23O43709 281 aaKnown RBP13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 OR1F1O43749 312 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 CDK2P24941 298 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ALDH3B1P43353 468 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SEMA3AQ14563 771 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 ZNF674Q2M3X9 581 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 SNX29P2Q8IUI4 249 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 MTMR8Q96EF0 704 aa13.6□□□□□ -0.23
CSPG4P12-202ENST00000559989 KATNBL1Q9H079 304 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms