RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 ZDHHC14Q8IZN3 488 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 RORBQ92753 470 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 APOLD1Q96LR9 279 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ASB16Q96NS5 453 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 GSDMCQ9BYG8 508 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SPAG4Q9NPE6 437 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 HPS4Q9NQG7 708 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 NUDT4Q9NZJ9 180 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 DYTNA2CJ06 578 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 H3BNX3 289 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 KMOO15229 486 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SEMA4FO95754 770 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 KRT20P35900 424 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 HMGCLP35914 325 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 IRF9Q00978 393 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 CREB5Q02930 508 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SULT1C3Q6IMI6 304 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 PPP4R4Q6NUP7 873 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 RANBP10Q6VN20 620 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 SETD7Q8WTS6 366 aaKnown RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 HSPBAP1Q96EW2 488 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 TSSK3Q96PN8 268 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 MGME1Q9BQP7 344 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 FAIM2Q9BWQ8 316 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF490Q9ULM2 529 aaPredicted RBP10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 ATAD5Q96QE3 1844 aa10.44□□□□□ -0.74
CARMIL3-202ENST00000559694 WDR90Q96KV7 1748 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 OR1F1O43749 312 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 OR1I1O60431 355 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 TIPRLO75663 272 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 HPCAL1P37235 193 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 ARSDP51689 593 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 RAD23AP54725 363 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 NRG1Q02297 640 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 SFT2D3Q587I9 215 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 PRRT3Q5FWE3 981 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 SFRP1Q8N474 314 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 EEF1AKMT1Q8WVE0 214 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC17A9Q9BYT1 436 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 TRIP12Q14669 1992 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 A0A1B0GVG6 124 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 WASH4PA8MWX3 477 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 LSM1O15116 133 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 CCNDBP1O95273 360 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 CLDN9O95484 217 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 FOXM1Q08050 763 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 KRR1Q13601 381 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 DGCR6Q14129 220 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 FRG1Q14331 258 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 DGKKQ5KSL6 1271 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 PRAMEF14Q5SWL7 426 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 HORMAD1Q86X24 394 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 NT5C3BQ969T7 300 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 OTULINQ96BN8 352 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 ZNF689Q96CS4 500 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 TXLNGYQ9BZA5 131 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 H3BSA7 217 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 SLC28A1O00337 649 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 OR10H2O60403 315 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 ZBTB11O95625 1053 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 SGSHP51688 502 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 LSM3P62310 102 aaKnown RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 DGUOKQ16854 277 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 TJAP1Q5JTD0 557 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 CLEC6AQ6EIG7 209 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 HPS1Q92902 700 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 CHFRQ96EP1 664 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 FCRL3Q96P31 734 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 MIPEPQ99797 713 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 PHF7Q9BWX1 381 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 C6orf62Q9GZU0 229 aaPredicted RBP10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 TEKT2Q9UIF3 430 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 IRAK3Q9Y616 596 aa10.43□□□□□ -0.74
CARMIL3-202ENST00000559694 TAF4O00268 1085 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 CDC7O00311 574 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 TPD52L2O43399 206 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 OR4F21O95013 312 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 SNRPB2P08579 225 aaKnown RBP10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 IMPDH2P12268 514 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 RGRP47804 291 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 FAM129CQ86XR2 697 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 FAM156AQ8NDB6 213 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 MYADMQ96S97 322 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 EPS8L2Q9H6S3 715 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 CXorf21Q9HAI6 301 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 GABBR2O75899 941 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 SIX3O95343 332 aaPredicted RBP10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 PPP2R1BP30154 601 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 SPINT3P49223 89 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 ARF5P84085 180 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 GTF2H2Q13888 395 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 GRIN2CQ14957 1233 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 ATP13A5Q4VNC0 1218 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 ATAD3BQ5T9A4 648 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 GTF2H2CQ6P1K8 395 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 TMEM132CQ8N3T6 1108 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 PNPLA1Q8N8W4 532 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 TMEM145Q8NBT3 493 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 OR7A2PQ8NGA2 310 aa10.42□□□□□ -0.74
CARMIL3-202ENST00000559694 CLHC1Q8NHS4 586 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms