RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 STYXQ8WUJ0 223 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 INPP5DQ92835 1189 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 C19orf60Q96EN9 201 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 CDKN2AIPNLQ96HQ2 116 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 CALR3Q96L12 384 aaKnown RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 AP1M1Q9BXS5 423 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 ZNF552Q9H707 407 aaPredicted RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 LUC7LQ9NQ29 371 aaKnown RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 ASF1BQ9NVP2 202 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 SPHK1Q9NYA1 384 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 OR6C2Q9NZP2 312 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 NDOR1Q9UHB4 597 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 POLG2Q9UHN1 485 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 GPN3Q9UHW5 284 aaPredicted RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 ERRFI1Q9UJM3 462 aaPredicted RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 CDYLQ9Y232 598 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 ASF1AQ9Y294 204 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 PTRH2Q9Y3E5 179 aaKnown RBP12.63□□□□□ -0.39
TPM1-220ENST00000559556 FBN2P35556 2912 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 C2CD3Q4AC94 2353 aa12.63□□□□□ -0.39
TPM1-220ENST00000559556 F8P00451 2351 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 MROH6A6NGR9 719 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 PEX12O00623 359 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 IPO13O94829 963 aaKnown RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 TJP3O95049 919 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 FTH1P02794 183 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 TPBGLP0DKB5 382 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 PEBP1P30086 187 aaKnown RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 GCGRP47871 477 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 DCDP81605 110 aaKnown RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 POU6F1Q14863 301 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 SPA17Q15506 151 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 SLC5A12Q1EHB4 618 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 NKAIN1Q4KMZ8 207 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 CRB2Q5IJ48 1285 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 C1orf189Q5VU69 101 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 LYPLAL1Q5VWZ2 237 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 TLDC1Q6P9B6 456 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 ARHGEF18Q6ZSZ5 1173 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 PPP1R32Q7Z5V6 425 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 ELMO1Q92556 727 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 ALG3Q92685 438 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 BARD1Q99728 777 aaKnown RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 SPRTNQ9H040 489 aaPredicted RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 LRRC40Q9H9A6 602 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 TXLNGQ9NUQ3 528 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 P4HTMQ9NXG6 502 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 SMARCAL1Q9NZC9 954 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 IFT80Q9P2H3 777 aaPredicted RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 DHCR7Q9UBM7 475 aaKnown RBP12.62□□□□□ -0.39
TPM1-220ENST00000559556 PRSS21Q9Y6M0 314 aa12.62□□□□□ -0.39
TPM1-220ENST00000559556 MED13LQ71F56 2210 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 SLC5A10A0PJK1 596 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 RCCD1A6NED2 376 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 AP2A1O95782 977 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 CLDN1O95832 211 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 CTSBP07858 339 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 UMODP07911 640 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 MSNP26038 577 aaKnown RBP12.61□□□□□ -0.39
TPM1-220ENST00000559556 FOXN2P32314 431 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 CYLC1P35663 651 aaPredicted RBP12.61□□□□□ -0.39
TPM1-220ENST00000559556 CETN2P41208 172 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 RWDD2BP57060 319 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 PLOD1Q02809 727 aaPredicted RBP12.61□□□□□ -0.39
TPM1-220ENST00000559556 SLC9A5Q14940 896 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 KIR2DS3Q14952 304 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 PARP6Q2NL67 630 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 AADACL2Q6P093 401 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 Q6ZS92 163 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 DNAJC22Q8N4W6 341 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 CISD2Q8N5K1 135 aaKnown RBP12.61□□□□□ -0.39
TPM1-220ENST00000559556 ZNF655Q8N720 491 aaPredicted RBP12.61□□□□□ -0.39
TPM1-220ENST00000559556 TM9SF4Q92544 642 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 FKBP10Q96AY3 582 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 NACC2Q96BF6 587 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 PTERQ96BW5 349 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 ILKAPQ9H0C8 392 aaPredicted RBP12.61□□□□□ -0.39
TPM1-220ENST00000559556 TSPY26PQ9H489 355 aa12.61□□□□□ -0.39
TPM1-220ENST00000559556 ANKUB1A6NFN9 424 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 BTNL10A8MVZ5 291 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 BHMG1C9JSJ3 638 aaPredicted RBP12.6□□□□□ -0.39
TPM1-220ENST00000559556 AGPSO00116 658 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 KDM1AO60341 852 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 METTL18O95568 372 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 TPH1P17752 444 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 PKLRP30613 574 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 FOXL2P58012 376 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 BRD3Q15059 726 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 CYP2A13Q16696 494 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 P3H1Q32P28 736 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 SYTL3Q4VX76 610 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 TMEM151BQ8IW70 566 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 LRRC57Q8N9N7 239 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 UBE2Q2Q8WVN8 375 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 DLG3Q92796 817 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 RANBP9Q96S59 729 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 NDC1Q9BTX1 674 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 MENTQ9BUN1 341 aa12.6□□□□□ -0.39
TPM1-220ENST00000559556 PLAGL1Q9UM63 463 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms