RNA–Protein interactions for RNA: ENST00000559092.1

SMAD3-210, Transcript of SMAD family member 3, humanhuman

TSL 4 BASIC

Gene SMAD3, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-210ENST00000559092 SPHK1Q9NYA1 384 aa17.01■□□□□ 0.31
SMAD3-210ENST00000559092 COL6A6A6NMZ7 2263 aa17.01■□□□□ 0.31
SMAD3-210ENST00000559092 SPTA1P02549 2419 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 A0A0J9YY10 115 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 HBQ1P09105 142 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 PVRP15151 417 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 TCP1P17987 556 aaKnown RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 CYP2A7P20853 494 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 CD9P21926 228 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 PKLRP30613 574 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 MAGEA3P43357 314 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 TERF1P54274 439 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 EIF3BP55884 814 aaKnown RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 NFATC3Q12968 1075 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 ERV3-1Q14264 604 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 ANKRD20A4Q4UJ75 823 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 CDHR3Q6ZTQ4 885 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 CILP2Q8IUL8 1156 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 NAT8LQ8N9F0 302 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 C19orf47Q8N9M1 422 aaKnown RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 CFAP61Q8NHU2 1237 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 MR1Q95460 341 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 CLIP3Q96DZ5 547 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 DPH2Q9BQC3 489 aaPredicted RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 MENTQ9BUN1 341 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 RAB11FIP5Q9BXF6 653 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 ACTL8Q9H568 366 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 AKIRIN1Q9H9L7 192 aaPredicted RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 INTS10Q9NVR2 710 aaKnown RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 POLHQ9Y253 713 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 FARSAQ9Y285 508 aaKnown RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 AP1M2Q9Y6Q5 423 aa17■□□□□ 0.31
SMAD3-210ENST00000559092 TLN1Q9Y490 2541 aaKnown RBP17■□□□□ 0.31
SMAD3-210ENST00000559092 ISM1B1AKI9 464 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 GOLGA8KD6RF30 607 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 E7EQ34 232 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 GOLGA8TH3BQL2 631 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 FKBP9O95302 570 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 S1PR4O95977 384 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 RAB40ALP0C0E4 278 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 ATP5DP30049 168 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 FMO4P31512 558 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 RORAP35398 523 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 GPS2Q13227 327 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 DHX34Q14147 1143 aaKnown RBP16.99■□□□□ 0.31
SMAD3-210ENST00000559092 GRB7Q14451 532 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 KCTD19Q17RG1 926 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-210ENST00000559092 CTSL3PQ5NE16 218 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 FAM199XQ6PEV8 388 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-210ENST00000559092 SYVN1Q86TM6 617 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 LMNTD2Q8IXW0 634 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 PPIL6Q8IXY8 311 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 GPR135Q8IZ08 494 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 DSELQ8IZU8 1212 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 OR2L8Q8NGY9 312 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 MAGEC3Q8TD91 643 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 THAP4Q8WY91 577 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 N4BP2L2Q92802 583 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-210ENST00000559092 SLCO2A1Q92959 643 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 RAD51AP1Q96B01 352 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 FOPNLQ96NB1 174 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 KLHL25Q9H0H3 589 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 ACTR5Q9H9F9 607 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-210ENST00000559092 KLHL42Q9P2K6 505 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 PLAGL1Q9UM63 463 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 HEMK1Q9Y5R4 338 aaPredicted RBP16.99■□□□□ 0.31
SMAD3-210ENST00000559092 KCNMB2Q9Y691 235 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 BSNQ9UPA5 3926 aa16.99■□□□□ 0.31
SMAD3-210ENST00000559092 RASGRF2O14827 1237 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 ZNF185O15231 689 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 CCNFP41002 786 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 GBX1Q14549 363 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 PPP1R7Q15435 360 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 ZIC1Q15915 447 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 UGT8Q16880 541 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 ATP1A1-AS1Q5TC04 95 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 PRAMEF17Q5VTA0 474 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 CENPUQ71F23 418 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 TRIM73Q86UV7 250 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 RAB42Q8N4Z0 105 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 LINC01555Q8NAE3 123 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 PDLIM2Q96JY6 352 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 CHST8Q9H2A9 424 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 FAM60AQ9NP50 221 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 PCMTD2Q9NV79 361 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 PCYOX1Q9UHG3 505 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 SLC39A10Q9ULF5 831 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 CRYL1Q9Y2S2 319 aa16.98■□□□□ 0.31
SMAD3-210ENST00000559092 ZCWPW2A0A1B0GU75 182 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 GOLGA8MH3BSY2 632 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 J3QKU1 62 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 ZNF749O43361 778 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 OR2B3O76000 313 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 USP1O94782 785 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 MATN4O95460 622 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 C1orf105O95561 183 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 PKMP14618 531 aaKnown RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 CHRM3P20309 590 aa16.97■□□□□ 0.31
SMAD3-210ENST00000559092 PEBP1P30086 187 aaKnown RBP16.97■□□□□ 0.31
SMAD3-210ENST00000559092 GABRA4P48169 554 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms