RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 TCAIMQ8N3R3 496 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 RAB3IL1Q8TBN0 382 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 UBTD2Q8WUN7 234 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 PATE1Q8WXA2 126 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 ATL1Q8WXF7 558 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 ZNF75CPQ92670 426 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 CXorf40BQ96DE9 158 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 L3HYPDHQ96EM0 354 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 CAMK1GQ96NX5 476 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 GATA5Q9BWX5 397 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 ERVK-6Q9BXR3 956 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 NUSAP1Q9BXS6 441 aaKnown RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 SMOC1Q9H4F8 434 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 GAREM1Q9H706 876 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 MANSC1Q9H8J5 431 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 IL21RQ9HBE5 538 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 STOX2Q9P2F5 926 aaPredicted RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 TDRKHQ9Y2W6 561 aaKnown RBP17.57■□□□□ 0.4
CLPX-203ENST00000558958 PCDH15Q96QU1 1955 aa17.57■□□□□ 0.4
CLPX-203ENST00000558958 PRAMEF33A0A0G2JMD5 474 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 B4DGG1 531 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 YKT6O15498 198 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 H2AFYO75367 372 aaKnown RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 SIX3O95343 332 aaPredicted RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 GGT5P36269 586 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 UBE2IP63279 158 aaKnown RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 ZXDCQ2QGD7 858 aaPredicted RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 DEFB133Q30KQ1 61 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 FBXO48Q5FWF7 155 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ZNF678Q5SXM1 525 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 CES4AQ5XG92 561 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ZCCHC23Q6ZST2 131 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 KANSL1Q7Z3B3 1105 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 PPP1R14CQ8TAE6 165 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 SLC37A2Q8TED4 501 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 TMEM79Q9BSE2 394 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 MENTQ9BUN1 341 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 C1QTNF3Q9BXJ4 246 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 CCDC134Q9H6E4 229 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 WWOXQ9NZC7 414 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 CPNE7Q9UBL6 633 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 TNPO3Q9Y5L0 923 aaKnown RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 LRRC14BA6NHZ5 514 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 KLF11O14901 512 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 KHNYNO15037 678 aaKnown RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 CER1O95813 267 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 SERPINE1P05121 402 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 RETP07949 1114 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 GIMD1P0DJR0 217 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 IMPA1P29218 277 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 EEF1DP29692 281 aaKnown RBP17.56■□□□□ 0.4
CLPX-203ENST00000558958 PCBP2Q15366 365 aaKnown RBP eCLIP17.56■□□□□ 0.4
CLPX-203ENST00000558958 UNC50Q53HI1 259 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 OGFOD3Q6PK18 319 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 RGS9BPQ6ZS82 235 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 TRIM48Q8IWZ4 208 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 CCNYL1Q8N7R7 359 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 LRRC8CQ8TDW0 803 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 SAP25Q8TEE9 199 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ZNF480Q8WV37 535 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ESAMQ96AP7 390 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 MOCOSQ96EN8 888 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 CAPS2Q9BXY5 557 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 KIR3DX1Q9H7L2 352 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 SLC40A1Q9NP59 571 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ACSS2Q9NR19 701 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 POT1Q9NUX5 634 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ADAM21Q9UKJ8 722 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 ASB1Q9Y576 335 aa17.56■□□□□ 0.4
CLPX-203ENST00000558958 CABIN1Q9Y6J0 2220 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 NOBOXO60393 691 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 VIPP01282 170 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 RPS17P08708 135 aaKnown RBP17.55■□□□□ 0.4
CLPX-203ENST00000558958 ERGP11308 486 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 GRK2P25098 689 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 HSD17B2P37059 387 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 SLC6A12P48065 614 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 HSPA7P48741 367 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 STX3Q13277 289 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 ARHGAP19Q14CB8 494 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 ATG16L1Q676U5 607 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 TCEAL6Q6IPX3 200 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 METTL2BQ6P1Q9 378 aaKnown RBP17.55■□□□□ 0.4
CLPX-203ENST00000558958 AGTRAPQ6RW13 159 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 SLC9B2Q86UD5 537 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 C17orf82Q86X59 251 aaPredicted RBP17.55■□□□□ 0.4
CLPX-203ENST00000558958 ZFPM2Q8WW38 1151 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 TCEAL3Q969E4 200 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 CD244Q9BZW8 370 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 IRF2BPLQ9H1B7 796 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 SPATA7Q9P0W8 599 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 GMEB2Q9UKD1 530 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 PLAGL1Q9UM63 463 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 WDR87Q6ZQQ6 2873 aa17.55■□□□□ 0.4
CLPX-203ENST00000558958 E2F3O00716 465 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 STK16O75716 305 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 SUPT7LO94864 414 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 ENGP17813 658 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 GDF5P43026 501 aa17.54■□□□□ 0.4
CLPX-203ENST00000558958 CCT8P50990 548 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms