RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 NDOR1Q9UHB4 597 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 PLCL2Q9UPR0 1127 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 PRSS21Q9Y6M0 314 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 PIKFYVEQ9Y2I7 2098 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 SEC16AO15027 2179 aa13.14□□□□□ -0.31
SNRPA1-204ENST00000558020 SPTBP11277 2137 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 TCRBV7S2A1N4TA0A589 114 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 OR51F1A6NGY5 319 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 AP3B1O00203 1094 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 KPNA5O15131 536 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 ZSCAN9O15535 394 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 LIASO43766 372 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 GOT2P00505 430 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 PIM1P11309 404 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 OTX2P32243 289 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 FOLR3P41439 243 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 TTPAP49638 278 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 RAB28P51157 221 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 HSPA14Q0VDF9 509 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 TMED2Q15363 201 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 NADK2Q4G0N4 442 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 FHL5Q5TD97 284 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 JMJD6Q6NYC1 403 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 C4orf22Q6V702 233 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 ZBTB2Q8N680 514 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 PPHLN1Q8NEY8 458 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 OR13J1Q8NGT2 312 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 DLG3Q92796 817 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 NACC2Q96BF6 587 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 PTERQ96BW5 349 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 CARD6Q9BX69 1037 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 SLC29A3Q9BZD2 475 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 SPRTNQ9H040 489 aaPredicted RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 FAM60AQ9NP50 221 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 RAB6BQ9NRW1 208 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 PTRH2Q9Y3E5 179 aaKnown RBP13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
SNRPA1-204ENST00000558020 KRT86O43790 486 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 OR1I1O60431 355 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 KLF7O75840 302 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 IPO13O94829 963 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 AGFG2O95081 481 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 APRTP07741 180 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 ARSFP54793 590 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 CSE1LP55060 971 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 ACVR1Q04771 509 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 ATP1A4Q13733 1029 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 OASLQ15646 514 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 KYNUQ16719 465 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 NKAIN1Q4KMZ8 207 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 ZC3H12BQ5HYM0 836 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 C1orf189Q5VU69 101 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 UNC5DQ6UXZ4 953 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 TRIM73Q86UV7 250 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 SLC22A15Q8IZD6 547 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 RAB42Q8N4Z0 105 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 ZNF655Q8N720 491 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 ATG4AQ8WYN0 398 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 TM9SF4Q92544 642 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 PNPLA2Q96AD5 504 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 SMAD5Q99717 465 aaKnown RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 NRTNQ99748 197 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 DESI2Q9BSY9 194 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 SPHK1Q9NYA1 384 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 PAK5Q9P286 719 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 MAP10Q9P2G4 905 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 SLC39A10Q9ULF5 831 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 MAP4K5Q9Y4K4 846 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 RELNP78509 3460 aa13.12□□□□□ -0.31
SNRPA1-204ENST00000558020 PFDN6O15212 129 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 S1PR4O95977 384 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CBSLP0DN79 551 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CD9P21926 228 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 ALAS2P22557 587 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CCR7P32248 378 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CBSP35520 551 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 SF1Q15637 639 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 INPP5JQ15735 1006 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 ZIC1Q15915 447 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 PCID2Q5JVF3 399 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 VWA5B1Q5TIE3 1220 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 FAM69BQ5VUD6 431 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 ZNF385CQ66K41 422 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 PTRHD1Q6GMV3 140 aaKnown RBP13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 NAPRTQ6XQN6 538 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 SLC13A5Q86YT5 568 aaPredicted RBP13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 DCUN1D3Q8IWE4 304 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 DNAJC22Q8N4W6 341 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 OR2Y1Q8NGV0 311 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CFAP61Q8NHU2 1237 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 VPS50Q96JG6 964 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 GBP5Q96PP8 586 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 PSMG3-AS1Q96PY0 264 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 PANX3Q96QZ0 392 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 NUDT9Q9BW91 350 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 RAB11FIP5Q9BXF6 653 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CASS4Q9NQ75 786 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 CATSPERZQ9NTU4 200 aa13.11□□□□□ -0.31
SNRPA1-204ENST00000558020 EURLQ9NYK6 297 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms