RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 GPLD1P80108 840 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 TARDBPQ13148 414 aaKnown RBP eCLIP11.9□□□□□ -0.54e-7■□□□□ 10
RCCD1-209ENST00000557750 SPIDRQ14159 915 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 TTC23LQ6PF05 361 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 NEK10Q6ZWH5 1172 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 RAPH1Q70E73 1250 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 USP53Q70EK8 1073 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 DCUN1D3Q8IWE4 304 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 MYO1HQ8N1T3 1032 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 OR52E1Q8NGJ3 308 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 ZFPM2Q8WW38 1151 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 POPDC3Q9HBV1 291 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 SYTL2Q9HCH5 934 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 POLG2Q9UHN1 485 aa11.9□□□□□ -0.5
RCCD1-209ENST00000557750 MGAQ8IWI9 3026 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 TK2O00142 265 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 ATXN7O15265 892 aaPredicted RBP11.89□□□□□ -0.51
RCCD1-209ENST00000557750 DUX1O43812 170 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 KDM1AO60341 852 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 KRT38O76015 456 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 MATN4O95460 622 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 SHBGP04278 402 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 MPC1LP0DKB6 136 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 BDKRB1P46663 353 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 INSM1Q01101 510 aaPredicted RBP11.89□□□□□ -0.51
RCCD1-209ENST00000557750 HDXQ7Z353 690 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 CMC1Q7Z7K0 106 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 NKAPQ8N5F7 415 aaKnown RBP11.89□□□□□ -0.51
RCCD1-209ENST00000557750 WDR48Q8TAF3 677 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 DCAKDQ8WVC6 231 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 LCN9Q8WX39 176 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 GFM1Q96RP9 751 aaKnown RBP11.89□□□□□ -0.51
RCCD1-209ENST00000557750 SRMSQ9H3Y6 488 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 RDH14Q9HBH5 336 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 CIDEBQ9UHD4 219 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 ZNF180Q9UJW8 692 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 ATXN7L1Q9ULK2 861 aaPredicted RBP11.89□□□□□ -0.51
RCCD1-209ENST00000557750 PLAGL1Q9UM63 463 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 AK5Q9Y6K8 562 aa11.89□□□□□ -0.51
RCCD1-209ENST00000557750 HMX2A2RU54 273 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 C1orf105O95561 183 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 CATP04040 527 aaKnown RBP11.88□□□□□ -0.51
RCCD1-209ENST00000557750 CNTFP26441 200 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
RCCD1-209ENST00000557750 CD1CP29017 333 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 CCNFP41002 786 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 ZKSCAN8Q15776 578 aaPredicted RBP11.88□□□□□ -0.51
RCCD1-209ENST00000557750 LGSNQ5TDP6 509 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 HES3Q5TGS1 186 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 KLHL35Q6PF15 583 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 TMEM207Q6UWW9 146 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 CYHR1Q6ZMK1 362 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 LRRC69Q6ZNQ3 347 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 OR4E2Q8NGC2 313 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 MAGEC3Q8TD91 643 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 NCSTNQ92542 709 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 RAD51AP1Q96B01 352 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 EPB41L1Q9H4G0 881 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 XKR8Q9H6D3 395 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 SNX15Q9NRS6 342 aa11.88□□□□□ -0.51
RCCD1-209ENST00000557750 ARHGEF17Q96PE2 2063 aaPredicted RBP11.88□□□□□ -0.51
RCCD1-209ENST00000557750 SMIM23A6NLE4 172 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 ARHGEF33A8MVX0 844 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 D6RAR5 112 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 NTN3O00634 580 aaPredicted RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 MAP2K7O14733 419 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 ZBTB14O43829 449 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 TCEA3O75764 348 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 CPNE6O95741 557 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 TSPAN12O95859 305 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 SYF2O95926 243 aaKnown RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 GCAP28676 217 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 CRABP2P29373 138 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 TYK2P29597 1187 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 SLCO1A2P46721 670 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 CAPZBP47756 277 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 SERPINB8P50452 374 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 IFFO1Q0D2I5 559 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 RTP5Q14D33 572 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 RBM44Q6ZP01 1051 aaKnown RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 UBE2R2Q712K3 238 aaPredicted RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 AMIGO1Q86WK6 493 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 OOSP2Q86WS3 158 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 ANKRD49Q8WVL7 239 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 ASB11Q8WXH4 323 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 RSC1A1Q92681 617 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 NRTNQ99748 197 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 NUDT22Q9BRQ3 303 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 DHRS4Q9BTZ2 278 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 TFB2MQ9H5Q4 396 aaKnown RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 HRASLS2Q9NWW9 162 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 PSMC3IPQ9P2W1 217 aaPredicted RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 FETUBQ9UGM5 382 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 TLK1Q9UKI8 766 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 RRP15Q9Y3B9 282 aaKnown RBP11.87□□□□□ -0.51
RCCD1-209ENST00000557750 ATMQ13315 3056 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 IQANK1A0A1B0GTG1 560 aa11.87□□□□□ -0.51
RCCD1-209ENST00000557750 KRT87PA6NCN2 255 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms