RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CHPFQ8IZ52 775 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CFAP52Q8N1V2 620 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 KRTCAP2Q8N6L1 136 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 TBC1D20Q96BZ9 403 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 LGALS12Q96DT0 336 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CEP295NLQ96MC4 621 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CPPED1Q9BRF8 314 aaPredicted RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 BTBD2Q9BX70 525 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 SLIRPQ9GZT3 109 aaKnown RBP11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 DSN1Q9H410 356 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 SP140LQ9H930 580 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 LRTM1Q9HBL6 345 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 CPNE5Q9HCH3 593 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 BPIFA1Q9NP55 256 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ASIC5Q9NY37 505 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 VNN3Q9NY84 501 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 FLRT1Q9NZU1 646 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 Q9Y3F1 56 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 DOCK3Q8IZD9 2030 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 TRPM7Q96QT4 1865 aa11.57□□□□□ -0.56
VIPAS39-211ENST00000557658 ISPDA4D126 451 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ARVCFO00192 962 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 FAM20BO75063 409 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ULK1O75385 1050 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 WDR47O94967 919 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 OXSR1O95747 527 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 GLUD1P00367 558 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 MAGEA2P43356 314 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PIK3CGP48736 1102 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 TPTEP56180 551 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 HMGCS1Q01581 520 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 GTF2H3Q13889 308 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 NADSYN1Q6IA69 706 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 RNF165Q6ZSG1 346 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 CYP2U1Q7Z449 544 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 TMEM132CQ8N3T6 1108 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF513Q8N8E2 541 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 KLHDC9Q8NEP7 349 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 MCFD2Q8NI22 146 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PSMA8Q8TAA3 256 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ZHX1-C8orf76Q96EF9 292 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 KCNH6Q9H252 994 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 NSUN3Q9H649 340 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ACOT13Q9NPJ3 140 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 TLR8Q9NR97 1041 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 THG1LQ9NWX6 298 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 KLQ9UEF7 1012 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PADI3Q9ULW8 664 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 SAMD4AQ9UPU9 718 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ATP11BQ9Y2G3 1177 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 A0A096LPI6 279 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 A0A0U1RQF3 1178 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PER2O15055 1255 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 GUCA1CO95843 209 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 GSNP06396 782 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 CD52P31358 61 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ALDH7A1P49419 539 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 GZMMP51124 257 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 HNRNPFP52597 415 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 FCGRTP55899 365 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 RING1Q06587 406 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 FADDQ13158 208 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 MAP2K5Q13163 448 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 SELENBP1Q13228 472 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PLEKHG6Q3KR16 790 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 VARS2Q5ST30 1063 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 NLGN2Q8NFZ4 835 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 GPR152Q8TDT2 470 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 TRIB2Q92519 343 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PARK7Q99497 189 aaKnown RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ADGRE3Q9BY15 652 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 NACA2Q9H009 215 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 P2RY12Q9H244 342 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 POLE4Q9NR33 117 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 AASSQ9UDR5 926 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 OSGIN1Q9UJX0 560 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ZNF490Q9ULM2 529 aaPredicted RBP11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 ERVK-11Q9UQG0 969 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PCDHB5Q9Y5E4 795 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 PCDHB1Q9Y5F3 818 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 RAI2Q9Y5P3 530 aa11.56□□□□□ -0.56
VIPAS39-211ENST00000557658 CLDN24A6NM45 220 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 ANKRD66B4E2M5 251 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 H7C0S8 307 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 WNT9AO14904 365 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 CD36P16671 472 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 CR2P20023 1033 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 GGT5P36269 586 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 EIF2DP41214 584 aaKnown RBP11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 GSSP48637 474 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 DAPP51397 102 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 ABHD18Q0P651 414 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 MTA1Q13330 715 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 CARD16Q5EG05 197 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 SGO1Q5FBB7 561 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 CATSPEREQ5SY80 951 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 LRIF1Q5T3J3 769 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 KDM4DQ6B0I6 523 aa11.55□□□□□ -0.56
VIPAS39-211ENST00000557658 LAIR1Q6GTX8 287 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms