RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ANKS6Q68DC2 871 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 CNSTQ6PJW8 725 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 NEK10Q6ZWH5 1172 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 BPHLQ86WA6 291 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 SPACA3Q8IXA5 215 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 ZBED8Q8IZ13 594 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 ADGRF3Q8IZF5 1079 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 FBXO36Q8NEA4 188 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 PYROXD1Q8WU10 500 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 HNRNPLLQ8WVV9 542 aaKnown RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 INPP5DQ92835 1189 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 RAD51AP1Q96B01 352 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 SLC41A2Q96JW4 573 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 AARSD1Q9BTE6 412 aaKnown RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 PHACTR1Q9C0D0 580 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 XKR8Q9H6D3 395 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 ACTR10Q9NZ32 417 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
SLIRP-211ENST00000557623 DHRS7Q9Y394 339 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 APC2O95996 2303 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 IGF2RP11717 2491 aa12.11□□□□□ -0.47
SLIRP-211ENST00000557623 EIF3FO00303 357 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-211ENST00000557623 MATN4O95460 622 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 C1orf105O95561 183 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 CBSLP0DN79 551 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 ENO3P13929 434 aaPredicted RBP12.1□□□□□ -0.47
SLIRP-211ENST00000557623 CBSP35520 551 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SKIV2L2P42285 1042 aaKnown RBP12.1□□□□□ -0.47
SLIRP-211ENST00000557623 ATP1A2P50993 1020 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 RAB28P51157 221 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 CLCN7P51798 805 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 PLTPP55058 493 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 ILF2Q12905 390 aaKnown RBP12.1□□□□□ -0.47
SLIRP-211ENST00000557623 CLN3Q13286 438 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 LRRC8EQ6NSJ5 796 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 ZNF549Q6P9A3 640 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 PALM2Q8IXS6 379 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 D2HGDHQ8N465 521 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SLC22A18Q96BI1 424 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 FAM136AQ96C01 138 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 OR6C1Q96RD1 312 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 WDR83Q9BRX9 315 aaKnown RBP12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SYTL2Q9HCH5 934 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 PDE7BQ9NP56 450 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SAYSD1Q9NPB0 183 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SOHLH2Q9NX45 425 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 NSMCE4AQ9NXX6 385 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 GRHL1Q9NZI5 618 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 GALPQ9UBC7 116 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SLC39A10Q9ULF5 831 aa12.1□□□□□ -0.47
SLIRP-211ENST00000557623 SNRNP200O75643 2136 aaKnown RBP12.1□□□□□ -0.47
SLIRP-211ENST00000557623 CTAGE15A4D2H0 777 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 RASGRF2O14827 1237 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 AHSGP02765 367 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CATP04040 527 aaKnown RBP12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CHRM5P08912 532 aaPredicted RBP12.09□□□□□ -0.47
SLIRP-211ENST00000557623 GSTA2P09210 222 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CTAGE8P0CG41 777 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 TPBGLP0DKB5 382 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 MPC1LP0DKB6 136 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 FGF5P12034 268 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CD9P21926 228 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 ITPKBP27987 946 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 PKLRP30613 574 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 TMPRSS3P57727 454 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 SH3BP2P78314 561 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 TLE3Q04726 772 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 MGAT5Q09328 741 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 KIR2DS3Q14952 304 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 FASTKD3Q14CZ7 662 aaKnown RBP12.09□□□□□ -0.47
SLIRP-211ENST00000557623 KLHL38Q2WGJ6 581 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 ACSBG2Q5FVE4 666 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 TRMT10BQ6PF06 316 aaKnown RBP12.09□□□□□ -0.47
SLIRP-211ENST00000557623 SPESP1Q6UW49 350 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CTAGE6Q86UF2 777 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 ZFAND4Q86XD8 727 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 PPP1R3BQ86XI6 285 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 DTX1Q86Y01 620 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 RASGRP3Q8IV61 690 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 MMGT1Q8N4V1 131 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 OR2L8Q8NGY9 312 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 OR8K5Q8NH50 307 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 PMEPA1Q969W9 287 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 FCRL4Q96PJ5 515 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 GPR21Q99679 349 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 CTRCQ99895 268 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 LRRC1Q9BTT6 524 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 PITPNM3Q9BZ71 974 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 FANCEQ9HB96 536 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 PLAC1Q9HBJ0 212 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 APMAPQ9HDC9 416 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 FAM114A2Q9NRY5 505 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 TAS2R13Q9NYV9 303 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 MOCS1Q9NZB8 636 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 SPATA7Q9P0W8 599 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 ZFATQ9P243 1243 aa12.09□□□□□ -0.47
SLIRP-211ENST00000557623 TRMT6Q9UJA5 497 aaKnown RBP12.09□□□□□ -0.47
SLIRP-211ENST00000557623 RARRES3Q9UL19 164 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms