RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 CADM3Q8N126 398 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 PGBD3Q8N328 593 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 LPCAT1Q8NF37 534 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 TRIB2Q92519 343 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 FCGR1BQ92637 280 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 OR52E6Q96RD3 313 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 CDK5RAP1Q96SZ6 601 aaKnown RBP15.94■□□□□ 0.14
SHMT2-232ENST00000557487 C19orf43Q9BQ61 176 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 NTMT1Q9BV86 223 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 FAM126AQ9BYI3 521 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-232ENST00000557487 LRTM1Q9HBL6 345 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 TM9SF3Q9HD45 589 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 FLRT1Q9NZU1 646 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 ANKMY1Q9P2S6 941 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 ANGPTL3Q9Y5C1 460 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 PCDHGA10Q9Y5H3 936 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 CCDC85CA6NKD9 419 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 ANKRD66B4E2M5 251 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 PER2O15055 1255 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 ULK1O75385 1050 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 CCNDBP1O95273 360 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 SERPINA1P01009 418 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 EBLN1P0CF75 366 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 CDKN1CP49918 316 aaPredicted RBP15.94■□□□□ 0.14
SHMT2-232ENST00000557487 GZMMP51124 257 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 PPP5CP53041 499 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 PIGFQ07326 219 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 RAPSNQ13702 412 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 TTLL9Q3SXZ7 439 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 SPANXN4Q5MJ08 99 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 PERM1Q5SV97 790 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 DET1Q7L5Y6 550 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 B3GNT8Q7Z7M8 397 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 DCBLD1Q8N8Z6 715 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 FRS2Q8WU20 508 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 ITCHQ96J02 903 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 HEPHQ9BQS7 1158 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 AGO1Q9UL18 857 aaKnown RBP15.94■□□□□ 0.14
SHMT2-232ENST00000557487 A3GALT2U3KPV4 340 aa15.94■□□□□ 0.14
SHMT2-232ENST00000557487 H0Y626 953 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 RGS10O43665 173 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 TRIM16O95361 564 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 BMP4P12644 408 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 CD52P31358 61 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 LAPTM5Q13571 262 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 CLCA4Q14CN2 919 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 SDHAF4Q5VUM1 108 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 GDF6Q6KF10 455 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-232ENST00000557487 BTLAQ7Z6A9 289 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 TMEM179BQ7Z7N9 219 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 TSPYL5Q86VY4 417 aaPredicted RBP15.93■□□□□ 0.14
SHMT2-232ENST00000557487 CHPFQ8IZ52 775 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 LIX1Q8N485 282 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 SPATA17Q96L03 361 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 IKZF5Q9H5V7 419 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 ERVK-18Q9QC07 812 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 OPTCQ9UBM4 332 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 UGT2A1Q9Y4X1 527 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 RAI2Q9Y5P3 530 aa15.93■□□□□ 0.14
SHMT2-232ENST00000557487 CHD5Q8TDI0 1954 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 ILVBLA1L0T0 632 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 SYN3O14994 580 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 TBX18O95935 607 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 INHAP05111 366 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 PRPS2P11908 318 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 ZNF7P17097 686 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 DGKAP23743 735 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 UGT2B10P36537 528 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 GPR15P49685 360 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 CLDN8P56748 225 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 PTGR1Q14914 329 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 PAGE2BQ5JRK9 111 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 KDM4DQ6B0I6 523 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 GCNT7Q6ZNI0 430 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 TAS2R42Q7RTR8 314 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 SNX20Q7Z614 316 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 ZDHHC21Q8IVQ6 265 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 KIAA1958Q8N8K9 716 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 RHOXF1Q8NHV9 184 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 CNIH3Q8TBE1 160 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 USP7Q93009 1102 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 ADAM2Q99965 735 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 TBCDQ9BTW9 1192 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 CD244Q9BZW8 370 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 SARS2Q9NP81 518 aaKnown RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 PKP3Q9Y446 797 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 A0A0D9SEW6 157 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 OR6C75A6NL08 312 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 TAF4O00268 1085 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 ACSL4O60488 711 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 DPM1O60762 260 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
SHMT2-232ENST00000557487 CLDN11O75508 207 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 FTH1P02794 183 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 HMBSP08397 361 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 BMP1P13497 986 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 AKR1A1P14550 325 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 FPR1P21462 350 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 NR4A1P22736 598 aa15.92■□□□□ 0.14
SHMT2-232ENST00000557487 DNAJA1P31689 397 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms