RNA–Protein interactions for RNA: ENST00000557433.5

SHMT2-231, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best)

Gene SHMT2, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-231ENST00000557433 A0A0D9SEW6 157 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 OR6C75A6NL08 312 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TAF4O00268 1085 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 ACSL4O60488 711 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 DPM1O60762 260 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 DUSP11O75319 330 aaKnown RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 CLDN11O75508 207 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 FTH1P02794 183 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 HMBSP08397 361 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 BMP1P13497 986 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 AKR1A1P14550 325 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 FPR1P21462 350 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 NR4A1P22736 598 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 DNAJA1P31689 397 aaKnown RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 USP39Q53GS9 565 aaKnown RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 CDKL4Q5MAI5 379 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 SPRYD7Q5W111 196 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 OR2T5Q6IEZ7 315 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TMEM53Q6P2H8 277 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 ZNF598Q86UK7 904 aaKnown RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 OR7D4Q8NG98 312 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 OR2T29Q8NH02 315 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 NDNFQ8TB73 568 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TRIB2Q92519 343 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 RDH14Q9HBH5 336 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 PARVBQ9HBI1 364 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 LTB4R2Q9NPC1 389 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 THG1LQ9NWX6 298 aaKnown RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 KIAA1522Q9P206 1035 aaPredicted RBP15.92■□□□□ 0.14
SHMT2-231ENST00000557433 PCDHB14Q9Y5E9 798 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 GMPPBQ9Y5P6 360 aa15.92■□□□□ 0.14
SHMT2-231ENST00000557433 TTC34A8MYJ7 566 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 MANBAO00462 879 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 XPNPEP2O43895 674 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 SEC22BO75396 215 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 SEC24AO95486 1093 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 KRT6AP02538 564 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 F11P03951 625 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 KRT6BP04259 564 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 ACPPP15309 386 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 PFKLP17858 780 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 EFNA1P20827 205 aaPredicted RBP15.91■□□□□ 0.14
SHMT2-231ENST00000557433 PRKACGP22612 351 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 CD6P30203 668 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 SERPINB1P30740 379 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 RGRP47804 291 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 KRT6CP48668 564 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 SLC11A2P49281 568 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 PLIN5Q00G26 463 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 IFITM3Q01628 133 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 TAF10Q12962 218 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 ABRQ12979 859 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 PTRHD1Q6GMV3 140 aaKnown RBP15.91■□□□□ 0.14
SHMT2-231ENST00000557433 ERICH5Q6P6B1 374 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 ARMC8Q8IUR7 673 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 NETO1Q8TDF5 533 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 TESCQ96BS2 214 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 CLPBQ9H078 707 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 MMP27Q9H306 513 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 IL1RAPQ9NPH3 570 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 ACOT13Q9NPJ3 140 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 RNF181Q9P0P0 153 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 DNMT3BQ9UBC3 853 aaKnown RBP15.91■□□□□ 0.14
SHMT2-231ENST00000557433 ZMYM5Q9UJ78 669 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 OSGIN1Q9UJX0 560 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 RPS6KA6Q9UK32 745 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 NDRG4Q9ULP0 352 aaKnown RBP15.91■□□□□ 0.14
SHMT2-231ENST00000557433 AP1M2Q9Y6Q5 423 aa15.91■□□□□ 0.14
SHMT2-231ENST00000557433 TRPM7Q96QT4 1865 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 TAPBPO15533 448 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 CA12O43570 354 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 GSNP06396 782 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 ZDHHC11BP0C7U3 371 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 HOXB9P17482 250 aaPredicted RBP15.9■□□□□ 0.14
SHMT2-231ENST00000557433 MAPK1P28482 360 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 GRK4P32298 578 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 S100A3P33764 101 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 HSPA7P48741 367 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 DSC1Q08554 894 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 SMARCB1Q12824 385 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 ZNF181Q2M3W8 571 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 PROX2Q3B8N5 592 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 UBE2UQ5VVX9 321 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 LYPLAL1Q5VWZ2 237 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 CES5AQ6NT32 575 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 GLB1LQ6UWU2 654 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 CHST9Q7L1S5 443 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 SERPINA11Q86U17 422 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 PLD3Q8IV08 490 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 LGALS12Q96DT0 336 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 MYEOVQ96EZ4 313 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 DACH2Q96NX9 599 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 HBEGFQ99075 208 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 PITX2Q99697 317 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 ZBED2Q9BTP6 218 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 SPON2Q9BUD6 331 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 SLIRPQ9GZT3 109 aaKnown RBP15.9■□□□□ 0.14
SHMT2-231ENST00000557433 NSUN3Q9H649 340 aaKnown RBP15.9■□□□□ 0.14
SHMT2-231ENST00000557433 WWOXQ9NZC7 414 aa15.9■□□□□ 0.14
SHMT2-231ENST00000557433 UTS2RQ9UKP6 389 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms