RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 ETV5P41161 510 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 SEPHS1P49903 392 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 MAPK10P53779 464 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 ERVPABLB-1P60509 514 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 GRB7Q14451 532 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 ST3GAL2Q16842 350 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 TBC1D25Q3MII6 688 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 KBTBD12Q3ZCT8 623 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 TEX35Q5T0J7 233 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 PAQR3Q6TCH7 311 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 PIWIL4Q7Z3Z4 852 aaKnown RBP13.17□□□□□ -0.3
SHMT2-228ENST00000557302 CARFQ8N187 725 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 RAB42Q8N4Z0 105 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 VPS39Q96JC1 886 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 ELMO2Q96JJ3 720 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 MAP3K3Q99759 626 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 OLFM1Q99784 485 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 ASCL3Q9NQ33 180 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 OCIAD1Q9NX40 245 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 SLC39A10Q9ULF5 831 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 NFU1Q9UMS0 254 aa13.17□□□□□ -0.3
SHMT2-228ENST00000557302 IGHV5-51A0A0C4DH38 117 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 PIPSLA2A3N6 862 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 ARHGEF33A8MVX0 844 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 CDRT15L2A8MXV6 281 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 B4E171 279 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 RASGRF2O14827 1237 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 C1QAP02745 245 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 CHRM5P08912 532 aaPredicted RBP13.16□□□□□ -0.3
SHMT2-228ENST00000557302 SAT1P21673 171 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 CDH3P22223 829 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 TSPAN7P41732 249 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 ARL4DP49703 201 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 KPNA2P52292 529 aaKnown RBP13.16□□□□□ -0.3
SHMT2-228ENST00000557302 NAB1Q13506 487 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 TMEM164Q5U3C3 297 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 CLEC14AQ86T13 490 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 PROSER1Q86XN7 944 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 KMT5CQ86Y97 462 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 SPNS2Q8IVW8 549 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 MYO1HQ8N1T3 1032 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 PPM1NQ8N819 430 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 EEF1AKMT1Q8WVE0 214 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 KLHL6Q8WZ60 621 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 USP7Q93009 1102 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 LINGO1Q96FE5 620 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 IL17FQ96PD4 163 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 TAAR9Q96RI9 348 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 MCMBPQ9BTE3 642 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 MENTQ9BUN1 341 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
SHMT2-228ENST00000557302 SLC39A1Q9NY26 324 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 ACTR10Q9NZ32 417 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 SPATA7Q9P0W8 599 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 SEMA5BQ9P283 1151 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 PCDHGA7Q9Y5G6 932 aa13.16□□□□□ -0.3
SHMT2-228ENST00000557302 MYO1CO00159 1063 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 ZBTB14O43829 449 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 ACSL3O95573 720 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 ZBTB11O95625 1053 aaPredicted RBP13.15□□□□□ -0.3
SHMT2-228ENST00000557302 UGT2B7P16662 529 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 NELFEP18615 380 aaKnown RBP13.15□□□□□ -0.3
SHMT2-228ENST00000557302 MAP4P27816 1152 aaKnown RBP13.15□□□□□ -0.3
SHMT2-228ENST00000557302 PRDX3P30048 256 aaKnown RBP13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SLC12A2P55011 1212 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 RAB15P59190 212 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 IL2P60568 153 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 MC2RQ01718 297 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 KIR2DS3Q14952 304 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SLMAPQ14BN4 828 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 CCSMST1Q4G0I0 132 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SPESP1Q6UW49 350 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 CYHR1Q6ZMK1 362 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 BMPERQ8N8U9 685 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 OR9A1PQ8NGU1 263 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 OR2L8Q8NGY9 312 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 ASB11Q8WXH4 323 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 FGF11Q92914 225 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SLC22A18Q96BI1 424 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SLC41A2Q96JW4 573 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 PPM1MQ96MI6 270 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 CYTH2Q99418 400 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 RBBP8Q99708 897 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 B3GNT4Q9C0J1 378 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 C1GALT1Q9NS00 363 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SIDT1Q9NXL6 827 aaKnown RBP13.15□□□□□ -0.3
SHMT2-228ENST00000557302 SPHK1Q9NYA1 384 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 LNPEPQ9UIQ6 1025 aa13.15□□□□□ -0.3
SHMT2-228ENST00000557302 ANKRD11Q6UB99 2663 aaPredicted RBP13.15□□□□□ -0.31
SHMT2-228ENST00000557302 KRT87PA6NCN2 255 aa13.14□□□□□ -0.31
SHMT2-228ENST00000557302 ISM1B1AKI9 464 aa13.14□□□□□ -0.31
SHMT2-228ENST00000557302 GFYI3L273 518 aa13.14□□□□□ -0.31
SHMT2-228ENST00000557302 NVLO15381 856 aaKnown RBP13.14□□□□□ -0.31
SHMT2-228ENST00000557302 PRAMEF10O60809 474 aa13.14□□□□□ -0.31
SHMT2-228ENST00000557302 KRT37O76014 449 aa13.14□□□□□ -0.31
SHMT2-228ENST00000557302 C8GP07360 202 aa13.14□□□□□ -0.31
SHMT2-228ENST00000557302 SLC5A2P31639 672 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms