RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SNX10Q9Y5X0 201 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 A0A1B0GVI7 797 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 GSG1L2A8MUP6 293 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 FFAR3O14843 346 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 GPR42O15529 346 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CD86P42081 329 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 RRAS2P62070 204 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 IFI44LQ53G44 452 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 NIPAL3Q6P499 406 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 AMIGO2Q86SJ2 522 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SLC15A3Q8IY34 581 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SLC43A3Q8NBI5 491 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 COQ8AQ8NI60 647 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 BTBD1Q9H0C5 482 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 XPNPEP1Q9NQW7 623 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 NCOR1O75376 2440 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CYP11A1P05108 521 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ETS2P15036 469 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 YBX3P16989 372 aaKnown RBP eCLIP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 RPL13AP40429 203 aaKnown RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 XKP51811 444 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 GPX6P59796 221 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ACTC1P68032 377 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ACTA1P68133 377 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 GAD2Q05329 585 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 MOGSQ13724 837 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TFAP2DQ7Z6R9 452 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 LAS2Q8IYD9 372 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF226Q9NYT6 803 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TNFRSF10DQ9UBN6 386 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 NR2E3Q9Y5X4 410 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 LILRB5O75023 590 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 C7P10643 843 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CMPK1P30085 196 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 HCAR3P49019 387 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 MRPS10P82664 201 aaKnown RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 FOXM1Q08050 763 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZFPM1Q8IX07 1006 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 LNX2Q8N448 690 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SPATA6LQ8N4H0 392 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 POLD4Q9HCU8 107 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TMX2Q9Y320 296 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TEX51A0A1B0GUA7 166 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 LCHNA4D1U4 455 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CAPN8A6NHC0 703 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 C8GP07360 202 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 UBAP2LQ14157 1087 aaKnown RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 MOGQ16653 247 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TIGD2Q4W5G0 525 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 C4orf17Q53FE4 359 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 C6orf183Q5T699 404 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SLC41A1Q8IVJ1 513 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SLC22A18Q96BI1 424 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TVP23AA6NH52 213 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 PEX11AO75192 247 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TRIM23P36406 574 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ACTA2P62736 377 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ACTG2P63267 376 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF155Q12901 538 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ELOAQ14241 798 aaKnown RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 KIAA0319Q5VV43 1072 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 GPR156Q8NFN8 814 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ITPKCQ96DU7 683 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 HYLS1Q96M11 299 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 IL7P13232 177 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 MTFMTQ96DP5 389 aaKnown RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CLIP3Q96DZ5 547 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 PHPT1Q9NRX4 125 aaPredicted RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 NPIPA7E9PJI5 369 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 LRRTM2O43300 516 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 RFPL1O75677 317 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SLITRK5O94991 958 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SNAPINO95295 136 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SGPL1O95470 568 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 NPIPA8P0DM63 369 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 EPHA3P29320 983 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 PRKXP51817 358 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TPRG1LQ5T0D9 272 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZCCHC23Q6ZST2 131 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF584Q8IVC4 421 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 PLA2G12BQ9BX93 195 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 POLR2J3Q9H1A7 115 aaKnown RBP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.68□□□□□ -1.02
SYNE3-205ENST00000557275 UCKL1Q9NWZ5 548 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 MAP3K4Q9Y6R4 1608 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 AQP12BA6NM10 295 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SLC7A1P30825 629 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 AQP12AQ8IXF9 295 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TEX19Q8NA77 164 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ZFAND2BQ8WV99 257 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ITPAQ9BY32 194 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 SEMA6CQ9H3T2 930 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 ASF1AQ9Y294 204 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 KDM6BO15054 1643 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 D6RAR5 112 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 HOXA9P31269 272 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM31Q5JXX7 168 aa8.68□□□□□ -1.02
SYNE3-205ENST00000557275 CREB3L2Q70SY1 520 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms