RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 NSMCE4AQ9NXX6 385 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 FOXJ2Q9P0K8 574 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SLC39A10Q9ULF5 831 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 PLAGL1Q9UM63 463 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SSUH2Q9Y2M2 353 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 VWA7Q9Y334 891 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 NFS1Q9Y697 457 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 FRYQ5TBA9 3013 aa10.35□□□□□ -0.75
LINC00239-201ENST00000556973 SLC9B1P1A6NJY1 282 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ISM1B1AKI9 464 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 RASGRF2O14827 1237 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ZBTB14O43829 449 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 PSIP1O75475 530 aaKnown RBP10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CATP04040 527 aaKnown RBP10.34□□□□□ -0.75
LINC00239-201ENST00000556973 FGF5P12034 268 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ITPKBP27987 946 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 SSTR1P30872 391 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 MAGEA4P43358 317 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 SH3BP2P78314 561 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CLN3Q13286 438 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CUL1Q13616 776 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 LRRC8EQ6NSJ5 796 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 FAM45BPQ6NSW5 357 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 SPESP1Q6UW49 350 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CEP128Q6ZU80 1094 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 STRA8Q7Z7C7 330 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ZFAND4Q86XD8 727 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 PPP1R3BQ86XI6 285 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 SPACA3Q8IXA5 215 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 NOA1Q8NC60 698 aaKnown RBP10.34□□□□□ -0.75
LINC00239-201ENST00000556973 FBXO15Q8NCQ5 510 aaPredicted RBP10.34□□□□□ -0.75
LINC00239-201ENST00000556973 OR2L8Q8NGY9 312 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 GIMAP7Q8NHV1 300 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 FAM45AQ8TCE6 357 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CD200R1Q8TD46 325 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ASB11Q8WXH4 323 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CDKL2Q92772 493 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 PMEPA1Q969W9 287 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 FCRL4Q96PJ5 515 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 TRAPPC9Q96Q05 1148 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 OR2A14Q96R47 310 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 NDNQ99608 321 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 NRTNQ99748 197 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 CTRCQ99895 268 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 SPRY4Q9C004 299 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 TSPYL1Q9H0U9 437 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 SYTL2Q9HCH5 934 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 APMAPQ9HDC9 416 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 PDE7BQ9NP56 450 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ZDHHC18Q9NUE0 388 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 LNPEPQ9UIQ6 1025 aa10.34□□□□□ -0.75
LINC00239-201ENST00000556973 TRMT6Q9UJA5 497 aaKnown RBP10.34□□□□□ -0.75
LINC00239-201ENST00000556973 ESYT3A0FGR9 886 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 GFYI3L273 518 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 SPAG6O75602 509 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 MSL3P1P0C860 447 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 FOLR1P15328 257 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 ST6GAL1P15907 406 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 UGT2B7P16662 529 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 MCM3P25205 808 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 MAP4P27816 1152 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 PKLRP30613 574 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 HSD17B2P37059 387 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 ABCG1P45844 678 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 RGS4P49798 205 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 UCNP55089 124 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 CDKN2DP55273 166 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 GPX6P59796 221 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 TIAL1Q01085 375 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 TLE3Q04726 772 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 PDAP1Q13442 181 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 KCNAB1Q14722 419 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 SLC5A12Q1EHB4 618 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 RBM20Q5T481 1227 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 HECTD2Q5U5R9 776 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 FBXO38Q6PIJ6 1188 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 PAQR3Q6TCH7 311 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 ZC3HC1Q86WB0 502 aaKnown RBP10.33□□□□□ -0.76
LINC00239-201ENST00000556973 CCDC25Q86WR0 208 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 RASGRP3Q8IV61 690 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 CPNE9Q8IYJ1 553 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 GPATCH11Q8N954 259 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 LINC01555Q8NAE3 123 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 OR9A1PQ8NGU1 263 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 OR8K5Q8NH50 307 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 FLVCR1-AS1Q8TAF5 88 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 HMGCLL1Q8TB92 370 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 EEF1AKMT1Q8WVE0 214 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 NKD1Q969G9 470 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 TCTN2Q96GX1 697 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 PPM1MQ96MI6 270 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 CHRNA10Q9GZZ6 450 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 LRRC4CQ9HCJ2 640 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 FGF21Q9NSA1 209 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 SOHLH2Q9NX45 425 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 SPHK1Q9NYA1 384 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 SPATA7Q9P0W8 599 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 SLC17A6Q9P2U8 582 aa10.33□□□□□ -0.76
LINC00239-201ENST00000556973 MTRF1LQ9UGC7 380 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms