RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 LOXL2Q9Y4K0 774 aa16.95■□□□□ 0.3
SHMT2-225ENST00000556798 FRYQ5TBA9 3013 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 RASGRF2O14827 1237 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 KDM1AO60341 852 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 SYF2O95926 243 aaKnown RBP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 ABHD2P08910 425 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 CHRM5P08912 532 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 GMPRP36959 345 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 SEPHS1P49903 392 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 KPNA2P52292 529 aaKnown RBP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 TRA2AQ13595 282 aaKnown RBP eCLIP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 NAA30Q147X3 362 aaPredicted RBP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 MROH9Q5TGP6 573 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 CACHD1Q5VU97 1274 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 LRRC8EQ6NSJ5 796 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 ARHGAP22Q7Z5H3 698 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 CMC1Q7Z7K0 106 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 RASGRP3Q8IV61 690 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 LINC01555Q8NAE3 123 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 WDR36Q8NI36 951 aaKnown RBP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 MAGEC3Q8TD91 643 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 DENND1AQ8TEH3 1009 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 ANKRD49Q8WVL7 239 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 SLC44A1Q8WWI5 657 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 DLG3Q92796 817 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 TSPAN17Q96FV3 270 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 MAP3K3Q99759 626 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 UNKQ9C0B0 810 aaKnown RBP16.94■□□□□ 0.3
SHMT2-225ENST00000556798 ACTR10Q9NZ32 417 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 POMT2Q9UKY4 750 aa16.94■□□□□ 0.3
SHMT2-225ENST00000556798 CHD8Q9HCK8 2581 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 EXOC1LA0A1B0GW35 172 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 PIPSLA2A3N6 862 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 HMX2A2RU54 273 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 C2orf74A8MZ97 194 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 GFYI3L273 518 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 MYO1CO00159 1063 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 INHBAP08476 426 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 STMN1P16949 149 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 ITIH1P19827 911 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 MAP4P27816 1152 aaKnown RBP16.93■□□□□ 0.3
SHMT2-225ENST00000556798 PEBP1P30086 187 aaKnown RBP16.93■□□□□ 0.3
SHMT2-225ENST00000556798 ILF2Q12905 390 aaKnown RBP16.93■□□□□ 0.3
SHMT2-225ENST00000556798 PRSS42Q7Z5A4 293 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 TRIM73Q86UV7 250 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 FBXO39Q8N4B4 442 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 OR9A1PQ8NGU1 263 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 UBLCP1Q8WVY7 318 aaPredicted RBP16.93■□□□□ 0.3
SHMT2-225ENST00000556798 GATA6Q92908 595 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 NXPE2Q96DL1 559 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 PKP4Q99569 1192 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 CMKLR1Q99788 373 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 POPDC3Q9HBV1 291 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 SYTL2Q9HCH5 934 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 OR6C2Q9NZP2 312 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 PISDQ9UG56 409 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 AK5Q9Y6K8 562 aa16.93■□□□□ 0.3
SHMT2-225ENST00000556798 WDFY3Q8IZQ1 3526 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 IGHV5-51A0A0C4DH38 117 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 NPEPPSL1A6NEC2 478 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 TLCD2A6NGC4 264 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 ISM1B1AKI9 464 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 PLD2O14939 933 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 HGSO14964 777 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 ZBTB14O43829 449 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 WISP3O95389 354 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 C8GP07360 202 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 JMJD7P0C870 316 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 CCL4P13236 92 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 UGT2B7P16662 529 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 CSTF2P33240 577 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 ETV5P41161 510 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 LSSP48449 732 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 RAB10P61026 200 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 EIF3IQ13347 325 aaKnown RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 FASTKQ14296 549 aaKnown RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 SLC29A2Q14542 456 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 ZKSCAN8Q15776 578 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 PHKG1Q16816 387 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 WDR93Q6P2C0 686 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 MBOAT1Q6ZNC8 495 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 FAM129CQ86XR2 697 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 SPATA6LQ8N4H0 392 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 RAB42Q8N4Z0 105 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 NKAPQ8N5F7 415 aaKnown RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 AGBL5Q8NDL9 886 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 OR2L8Q8NGY9 312 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 RAB11FIP5Q9BXF6 653 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 TMEM121BQ9BXQ6 578 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 NRSN2Q9GZP1 204 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 KLHL25Q9H0H3 589 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 ZNF768Q9H5H4 540 aaKnown RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 POLR1BQ9H9Y6 1135 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 OCIAD1Q9NX40 245 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 AKAP7Q9P0M2 348 aaPredicted RBP16.92■□□□□ 0.3
SHMT2-225ENST00000556798 SPATA7Q9P0W8 599 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 PDE10AQ9Y233 779 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 IKBKGQ9Y6K9 419 aa16.92■□□□□ 0.3
SHMT2-225ENST00000556798 HEATR5BQ9P2D3 2071 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms