RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 OR5AR1Q8NGP9 310 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 FLVCR1-AS1Q8TAF5 88 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 DLG3Q92796 817 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 HAUS1Q96CS2 278 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 VPS50Q96JG6 964 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 QKIQ96PU8 341 aaKnown RBP eCLIP12.18□□□□□ -0.46
SHMT2-223ENST00000556689 LMF1Q96S06 567 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 APOL2Q9BQE5 337 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 LHPPQ9H008 270 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 GBA3Q9H227 469 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ZNHIT6Q9NWK9 470 aaKnown RBP12.18□□□□□ -0.46
SHMT2-223ENST00000556689 SPHK1Q9NYA1 384 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ASF1AQ9Y294 204 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 ABCA12Q86UK0 2595 aa12.18□□□□□ -0.46
SHMT2-223ENST00000556689 CCDC78A2IDD5 438 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ISM1B1AKI9 464 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 H7C0C1 242 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 SOCS6O14544 535 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 LIN7AO14910 233 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ALOX12BO75342 701 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 JRKO75564 520 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ZRANB2O95218 330 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ONECUT2O95948 504 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ACRV1P26436 265 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 RBL1P28749 1068 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 MC4RP32245 332 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ATP5OP48047 213 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 CDKN1CP49918 316 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ZNF140P52738 457 aaPredicted RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ART3Q13508 389 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 OLIG2Q13516 323 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 PRPSAP1Q14558 356 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 RPUSD3Q6P087 351 aaKnown RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 FAM180AQ6UWF9 173 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 KIRREL2Q6UWL6 708 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 ISLR2Q6UXK2 745 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 TTLL10Q6ZVT0 673 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 TAS2R42Q7RTR8 314 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 SERPINA9Q86WD7 417 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 MCATQ8IVS2 390 aaKnown RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 TBC1D21Q8IYX1 336 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 RCOR2Q8IZ40 523 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 CLDN19Q8N6F1 224 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 BCORP1Q8N888 145 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 RELTQ969Z4 430 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 FKBP10Q96AY3 582 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 FERMT1Q9BQL6 677 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 GORASP1Q9BQQ3 440 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 C10orf88Q9H8K7 445 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 WDR54Q9H977 334 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 OLAHQ9NV23 265 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 EURLQ9NYK6 297 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 IFNKQ9P0W0 207 aa12.17□□□□□ -0.46
SHMT2-223ENST00000556689 TDRKHQ9Y2W6 561 aaKnown RBP12.17□□□□□ -0.46
SHMT2-223ENST00000556689 MDC1Q14676 2089 aaKnown RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 TRBV5-4A0A0C4DH59 114 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 CCL22O00626 93 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 PSTPIP1O43586 416 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 KDM1AO60341 852 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 AP2A2O94973 939 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 ACADLP28330 430 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 OTUD4Q01804 1114 aaKnown RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 KIR2DS3Q14952 304 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 NKG7Q16617 165 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 ZXDCQ2QGD7 858 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 LINC00696Q6ZRV3 163 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 TMTC1Q8IUR5 882 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 CATSPER1Q8NEC5 780 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 OR1N1Q8NGS0 311 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 THOC3Q96J01 351 aaKnown RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 CCDC42Q96M95 316 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 SLX1AQ9BQ83 275 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 SLC26A1Q9H2B4 701 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 MRM3Q9HC36 420 aaKnown RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 SMARCAL1Q9NZC9 954 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 FEZ2Q9UHY8 353 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 KLF2Q9Y5W3 355 aaPredicted RBP12.16□□□□□ -0.46
SHMT2-223ENST00000556689 HS3ST3B1Q9Y662 390 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 ALG6Q9Y672 507 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 CROCCQ5TZA2 2017 aa12.16□□□□□ -0.46
SHMT2-223ENST00000556689 hCG_1818297A0A087WSY0 165 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 A0A1B0GX78 115 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 AP2A1O95782 977 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 TPBGLP0DKB5 382 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 ITGAXP20702 1163 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 GCGRP47871 477 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 MFAP5Q13361 173 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 BRD3Q15059 726 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 TCEAL1Q15170 157 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 TUBB8Q3ZCM7 444 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 ANKRD20A2Q5SQ80 823 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 ANKRD20A1Q5TYW2 823 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 ANKRD20A3Q5VUR7 823 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 DENND5AQ6IQ26 1287 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 CCDC50Q8IVM0 306 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 FAM20CQ8IXL6 584 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 OR11G2Q8NGC1 345 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 OR5K2Q8NHB8 316 aa12.15□□□□□ -0.46
SHMT2-223ENST00000556689 DNAJC1Q96KC8 554 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms