RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 TAF13Q15543 124 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 ITPRIPL2Q3MIP1 535 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 CFAP58Q5T655 872 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 ERMARDQ5T6L9 678 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 GPR139Q6DWJ6 353 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 ZNF790Q6PG37 636 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 CAMKMTQ7Z624 323 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 PIGZQ86VD9 579 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 TMEM139Q8IV31 216 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 TC2NQ8N9U0 490 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 KBTBD8Q8NFY9 601 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 OR11H4Q8NGC9 324 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 TEKT4Q8WW24 435 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 SSMEM1Q8WWF3 244 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 GIMAP5Q96F15 307 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 SLF1Q9BQI6 1058 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 CENPOQ9BU64 300 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 GPR88Q9GZN0 384 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 OPA3Q9H6K4 179 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 GKN1Q9NS71 199 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 ANKEF1Q9NU02 776 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 HAO2Q9NYQ3 351 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 IL17BQ9UHF5 180 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 DDX25Q9UHL0 483 aaKnown RBP4.08□□□□□ -1.76
SCFD1-221ENST00000556534 DAPK2Q9UIK4 370 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 ABT1Q9ULW3 272 aaKnown RBP4.08□□□□□ -1.76
SCFD1-221ENST00000556534 PYGO1Q9Y3Y4 419 aa4.08□□□□□ -1.76
SCFD1-221ENST00000556534 A0A1W2PPQ1 181 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 PSMD10O75832 226 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 IGLV1-44P01699 117 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 GPIP06744 558 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 HSPA8P11142 646 aaKnown RBP4.07□□□□□ -1.76
SCFD1-221ENST00000556534 CA6P23280 308 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 MTHFRP42898 656 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 CCR3P51677 355 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 ZNF415Q09FC8 603 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 ITGA9Q13797 1035 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 FCN2Q15485 313 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 CA9Q16790 459 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 C14orf177Q52M58 125 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 SYT14P1Q58G82 188 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 FAM198BQ6UWH4 519 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 PLPPR4Q7Z2D5 763 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 POGLUT1Q8NBL1 392 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 HPSE2Q8WWQ2 592 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 SEPHS2Q99611 448 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 NUP85Q9BW27 656 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 INTS9Q9NV88 658 aaKnown RBP4.07□□□□□ -1.76
SCFD1-221ENST00000556534 SPHK1Q9NYA1 384 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 CACNG4Q9UBN1 327 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 PADI2Q9Y2J8 665 aa4.07□□□□□ -1.76
SCFD1-221ENST00000556534 IGHV4-4A0A075B6R2 117 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 TRBC2A0A5B9 178 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 TRIM77I1YAP6 450 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 PSMD14O00487 310 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 IPO8O15397 1037 aaKnown RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 SPRY1O43609 319 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 AP2A2O94973 939 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 RAB40ALP0C0E4 278 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 IGHV4-31P0DP07 118 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 HAPLN1P10915 354 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 ZNF26P17031 533 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 KRTAP10-7P60409 375 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 CDR2Q01850 454 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 ALCAMQ13740 583 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 ADAMTSL4-AS1Q5T5F5 129 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 CYP4A22Q5TCH4 519 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 PRR27Q6MZM9 219 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 NAA16Q6N069 864 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 POMGNT2Q8NAT1 580 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 ZNF248Q8NDW4 579 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 DDHD1Q8NEL9 900 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 OR4C3Q8NH37 302 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 OR52N5Q8NH56 324 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 PHLDA1Q8WV24 401 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 SYN2Q92777 582 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 WBP2Q969T9 261 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 ARSGQ96EG1 525 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 LINC00615Q96LM1 132 aaPredicted RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 SFXN2Q96NB2 322 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 RAD9AQ99638 391 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 WDR13Q9H1Z4 485 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 NOL11Q9H8H0 719 aaKnown RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 CNOT10Q9H9A5 744 aaKnown RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 FGF22Q9HCT0 170 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 MYNNQ9NPC7 610 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 FGF21Q9NSA1 209 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 INTS10Q9NVR2 710 aaKnown RBP4.06□□□□□ -1.76
SCFD1-221ENST00000556534 CACNG5Q9UF02 275 aa4.06□□□□□ -1.76
SCFD1-221ENST00000556534 PTGESO14684 152 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 CDC123O75794 336 aaPredicted RBP4.05□□□□□ -1.76
SCFD1-221ENST00000556534 CGAP01215 116 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 SMIM18P0DKX4 95 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 MNDAP41218 407 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 MAGEA11P43364 429 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 ZNF75DP51815 510 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 ERVK11-1P61568 191 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 KCNJ10P78508 379 aa4.05□□□□□ -1.76
SCFD1-221ENST00000556534 TUBB2AQ13885 445 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms