RNA–Protein interactions for RNA: ENST00000556486.5

SCFD1-220, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 974 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-220ENST00000556486 FCRL5Q96RD9 977 aa9.73□□□□□ -0.85
SCFD1-220ENST00000556486 ILKAPQ9H0C8 392 aaPredicted RBP9.73□□□□□ -0.85
SCFD1-220ENST00000556486 SNX7Q9UNH6 387 aa9.73□□□□□ -0.85
SCFD1-220ENST00000556486 ENTPD4Q9Y227 616 aa9.73□□□□□ -0.85
SCFD1-220ENST00000556486 CCDC88CQ9P219 2028 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 GLYATL1P3A0A0U1RQE8 302 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 OR5K3A6NET4 321 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 AGAP14A8MT82 685 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 PSTPIP1O43586 416 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 AKR1B10O60218 316 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 SCRG1O75711 98 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 POP7O75817 140 aaKnown RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 LCA5LO95447 670 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 SLC4A1P02730 911 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 KRT1P04264 644 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 PYGMP11217 842 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 MTHFD1P11586 935 aaKnown RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 CTSCP53634 463 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 TUBB4BP68371 445 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 HSD11B2P80365 405 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 PDE1BQ01064 536 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 MPP3Q13368 585 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 TUBB2AQ13885 445 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 LLGL1Q15334 1064 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 SLC1A5Q15758 541 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 ZXDCQ2QGD7 858 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 SIRPB2Q5JXA9 342 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 GPRC6AQ5T6X5 926 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 MFSD7Q6UXD7 560 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 FAM83HQ6ZRV2 1179 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 RFX6Q8HWS3 928 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 SLC34A3Q8N130 599 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 VWA5B2Q8N398 1253 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 ZBTB2Q8N680 514 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 GPR150Q8NGU9 434 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 KISS1RQ969F8 398 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 OXNAD1Q96HP4 312 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 TTC25Q96NG3 672 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 MAP3K3Q99759 626 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 TUBB2BQ9BVA1 445 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 DEF6Q9H4E7 631 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 ZBTB20Q9HC78 741 aaPredicted RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 BPIFA1Q9NP55 256 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 FGF21Q9NSA1 209 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 ABHD10Q9NUJ1 306 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 ZNHIT6Q9NWK9 470 aaKnown RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 TRHDEQ9UKU6 1024 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 ACSL5Q9ULC5 683 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 BTRCQ9Y297 605 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 CSAG2Q9Y5P2 127 aa9.72□□□□□ -0.85
SCFD1-220ENST00000556486 COPG1Q9Y678 874 aaKnown RBP9.72□□□□□ -0.85
SCFD1-220ENST00000556486 MED13LQ71F56 2210 aa9.71□□□□□ -0.85
SCFD1-220ENST00000556486 MGAT4DA6NG13 374 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 CST8O60676 142 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 RGS9O75916 674 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 ZBTB11O95625 1053 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 PGRP06401 933 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 ARAFP10398 606 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 PECAM1P16284 738 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 LPOP22079 712 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 OTX2P32243 289 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 CHRNA4P43681 627 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 ARCN1P48444 511 aaKnown RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 VAV2P52735 878 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 FOXL2P58012 376 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 NFE2L1Q14494 772 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 ZRSR2Q15696 482 aaKnown RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 BCL7AQ4VC05 210 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 TFDP3Q5H9I0 405 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 IZUMO3Q5VZ72 239 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 GLT6D1Q7Z4J2 308 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 FJX1Q86VR8 437 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 ZNF567Q8N184 647 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 OR2L2Q8NH16 312 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 GDAP1Q8TB36 358 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 UBE2Q2Q8WVN8 375 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 CCDC42Q96M95 316 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 PPM1MQ96MI6 270 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 CHP1Q99653 195 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 DHRS4Q9BTZ2 278 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 KIR3DX1Q9H7L2 352 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 SAE1Q9UBE0 346 aaPredicted RBP9.71□□□□□ -0.86
SCFD1-220ENST00000556486 ADAM30Q9UKF2 790 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 TCFL5Q9UL49 500 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 B3GNT3Q9Y2A9 372 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 PKP3Q9Y446 797 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 SPTBP11277 2137 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 SEC16AO15027 2179 aa9.71□□□□□ -0.86
SCFD1-220ENST00000556486 HACD1B0YJ81 288 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 ALG1L2C9J202 215 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 MATN2O00339 956 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 GPR39O43194 453 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 SGTAO43765 313 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A9O60656 530 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 MFAP3LO75121 409 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A6P19224 532 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 COMTP21964 271 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A1P22309 533 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 UGT1A4P22310 534 aa9.7□□□□□ -0.86
SCFD1-220ENST00000556486 ADH6P28332 368 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms