RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 LCN9Q8WX39 176 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 FBXL8Q96CD0 374 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PHF21BQ96EK2 531 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 MAGEB10Q96LZ2 347 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 GPR78Q96P69 363 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 TRMOQ9BU70 441 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 ERVK-6Q9BXR3 956 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PCBD2Q9H0N5 130 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 TCEAL2Q9H3H9 227 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 KIR3DX1Q9H7L2 352 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PRM3Q9NNZ6 103 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 ZNF358Q9NW07 568 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 OXSMQ9NWU1 459 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 SIRPGQ9P1W8 387 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 CPNE7Q9UBL6 633 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 GULP1Q9UBP9 304 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 KLF15Q9UIH9 416 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 ADAMTS6Q9UKP5 1117 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 EMCNQ9ULC0 261 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PDE10AQ9Y233 779 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 DYRK1BQ9Y463 629 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 PLEKHM1Q9Y4G2 1056 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 GON4LQ3T8J9 2241 aa10.9□□□□□ -0.66
SHMT2-220ENST00000555634 COL5A1P20908 1838 aaPredicted RBP10.9□□□□□ -0.66
SHMT2-220ENST00000555634 WDR91A4D1P6 747 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 FAM221BA6H8Z2 402 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 TMEM114B3SHH9 223 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 MATN2O00339 956 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 HGSO14964 777 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 CCNT2O60583 730 aaKnown RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 WDR47O94967 919 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 HSPA4LO95757 839 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 MLYCDO95822 493 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 LMNAP02545 664 aaKnown RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 SERPINE1P05121 402 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 ZNF883P0CG24 379 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 XRCC1P18887 633 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 KCNA4P22459 653 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 EEF1DP29692 281 aaKnown RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 GMPRP36959 345 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 ETV4P43268 484 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 DUSP3P51452 185 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 PNLIPRP1P54315 467 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 DNAJB13P59910 316 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 CHI3L2Q15782 390 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 RBBP7Q16576 425 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 PHKG1Q16816 387 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 C14orf28Q4W4Y0 310 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 IYDQ6PHW0 289 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 OOSP2Q86WS3 158 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 C10orf107Q8IVU9 208 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 SFRP1Q8N474 314 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 MINDY1Q8N5J2 469 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 SNX31Q8N9S9 440 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 PRSS33Q8NF86 280 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 SLC22A18Q96BI1 424 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 L3HYPDHQ96EM0 354 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 MAGEB18Q96M61 343 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 INSM2Q96T92 566 aaPredicted RBP10.89□□□□□ -0.67
SHMT2-220ENST00000555634 SLC38A3Q99624 504 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 CAPS2Q9BXY5 557 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 DRC3Q9H069 523 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 SRMSQ9H3Y6 488 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 EPB41L1Q9H4G0 881 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 WDR37Q9Y2I8 494 aa10.89□□□□□ -0.67
SHMT2-220ENST00000555634 A6NCN8 305 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 PRR19A6NJB7 356 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 CLGNO14967 610 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 YY2O15391 372 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 FLRT2O43155 660 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 PCDHGA12O60330 932 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 DLX3O60479 287 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 STK16O75716 305 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 SUPT7LO94864 414 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 SLC16A8O95907 504 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 CHEK2O96017 543 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 OTCP00480 354 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 CELA2BP08218 269 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 DHRS4L1P0CG22 281 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 EPB42P16452 691 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 MDH1P40925 334 aaKnown RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 GRK6P43250 576 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 FASLGP48023 281 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 TBPL1P62380 186 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 DAB2P98082 770 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 PRKG2Q13237 762 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 STX3Q13277 289 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 CLCA4Q14CN2 919 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 NR0B2Q15466 257 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 AASDHQ4L235 1098 aaPredicted RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 DUS1LQ6P1R4 473 aaKnown RBP10.88□□□□□ -0.67
SHMT2-220ENST00000555634 AGTRAPQ6RW13 159 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 CYHR1Q6ZMK1 362 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 NRROSQ86YC3 692 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 TBC1D19Q8N5T2 526 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 OR4C6Q8NH72 309 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 MDM1Q8TC05 714 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 SLC37A2Q8TED4 501 aa10.88□□□□□ -0.67
SHMT2-220ENST00000555634 SMPDL3AQ92484 453 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms