RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 DTX1Q86Y01 620 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 PLXDC1Q8IUK5 500 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 BEND7Q8N7W2 519 aaPredicted RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 GPATCH11Q8N954 259 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 OR2L2Q8NH16 312 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 HM13Q8TCT9 377 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 NCSTNQ92542 709 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 LPGAT1Q92604 370 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 PMEPA1Q969W9 287 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CXorf40BQ96DE9 158 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TSPAN17Q96FV3 270 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TAAR9Q96RI9 348 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TSSK1BQ9BXA7 367 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 TMBIM4Q9HC24 238 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 SIDT1Q9NXL6 827 aaKnown RBP9.39□□□□□ -0.91
ACTN1-215ENST00000555616 EURLQ9NYK6 297 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 SENP1Q9P0U3 644 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CTNNAL1Q9UBT7 734 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 GNPTGQ9UJJ9 305 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 CRYL1Q9Y2S2 319 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 AHCTF1Q8WYP5 2266 aa9.39□□□□□ -0.91
ACTN1-215ENST00000555616 KIF26BQ2KJY2 2108 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 MGAQ8IWI9 3026 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 FAM95CA0A1B0GW59 222 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 HMGB1P1B2RPK0 211 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 H3BQF6 201 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 QSOX1O00391 747 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 SYF2O95926 243 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 MT-ND3P03897 115 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 SLC35G4P0C7Q5 338 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 PKMP14618 531 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 RPS3P23396 243 aaKnown RBP eCLIP9.38□□□□□ -0.912e-6■□□□□ 10.5
ACTN1-215ENST00000555616 GABRB3P28472 473 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 OAS2P29728 719 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 PBLDP30039 288 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 FMO4P31512 558 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 PPM1FP49593 454 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 POU4F1Q01851 419 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 VAC14Q08AM6 782 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 BMPR2Q13873 1038 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 USP10Q14694 798 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 SOWAHCQ53LP3 525 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 MROH9Q5TGP6 573 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 AGBL2Q5U5Z8 902 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 PTRHD1Q6GMV3 140 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 FAM45BPQ6NSW5 357 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 MICALCLQ6ZW33 695 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 PRSS42Q7Z5A4 293 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 FAM45AQ8TCE6 357 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 NAT14Q8WUY8 206 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 RSC1A1Q92681 617 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 ATP6V1G3Q96LB4 118 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 RMDN2Q96LZ7 410 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 BBC3Q96PG8 261 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 TEFMQ96QE5 360 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 UBL7Q96S82 380 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 CCNL2Q96S94 520 aaPredicted RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 GPR22Q99680 433 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 MCMBPQ9BTE3 642 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 ASPSCR1Q9BZE9 553 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 RAB33BQ9H082 229 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 CPNE5Q9HCH3 593 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 IMP3Q9NV31 184 aaKnown RBP9.38□□□□□ -0.91
ACTN1-215ENST00000555616 OCIAD1Q9NX40 245 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 EPHA6Q9UF33 1036 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 ACSL5Q9ULC5 683 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 SLC39A10Q9ULF5 831 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 PSMD13Q9UNM6 376 aa9.38□□□□□ -0.91
ACTN1-215ENST00000555616 C17orf113A0A1B0GUU1 675 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 EFCAB7A8K855 629 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 E5RI56 91 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 STMND1H3BQB6 276 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 K7ENP7 123 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 OR1I1O60431 355 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 VPS26AO75436 327 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 AP2A2O94973 939 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 F7P08709 466 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 GSTM1P09488 218 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 OR56A5P0C7T3 313 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ATP1B2P14415 290 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 STMN1P16949 149 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 TYRP1P17643 537 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 SAT1P21673 171 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 CRABP2P29373 138 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 TYK2P29597 1187 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 MC2RQ01718 297 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 GSTM4Q03013 218 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 TGIF1Q15583 401 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 TAF1BQ53T94 588 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ZNF789Q5FWF6 425 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 SNAP47Q5SQN1 464 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 UGT3A1Q6NUS8 523 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 DUS1LQ6P1R4 473 aaKnown RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 KLHL35Q6PF15 583 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 INO80CQ6PI98 192 aaPredicted RBP9.37□□□□□ -0.91
ACTN1-215ENST00000555616 TIFABQ6ZNK6 161 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 RAPH1Q70E73 1250 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 CCDC91Q7Z6B0 441 aa9.37□□□□□ -0.91
ACTN1-215ENST00000555616 ZFAND4Q86XD8 727 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms