RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 SOX13Q9UN79 622 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 SNX7Q9UNH6 387 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 CDYLQ9Y232 598 aa23.62■■□□□ 1.37
PRKCH-216ENST00000555542 GOLGA8KD6RF30 607 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 GOLGA8TH3BQL2 631 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 ZNF749O43361 778 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 OR2B3O76000 313 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 PAMP19021 973 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 AGXTP21549 392 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 PKLRP30613 574 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 KCNC4Q03721 635 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 KCNJ11Q14654 390 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 PTCHD3Q3KNS1 767 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 ZNF789Q5FWF6 425 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 ENDOVQ8N8Q3 282 aaKnown RBP23.61■■□□□ 1.37
PRKCH-216ENST00000555542 THAP4Q8WY91 577 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 P2RY12Q9H244 342 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 FAM60AQ9NP50 221 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 PCMTD2Q9NV79 361 aa23.61■■□□□ 1.37
PRKCH-216ENST00000555542 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.6■■□□□ 1.37
PRKCH-216ENST00000555542 C9J4A7 227 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 WISP1O95388 367 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 ATXN8OSP0DMR3 200 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 RPS3P23396 243 aaKnown RBP eCLIP23.6■■□□□ 1.37
PRKCH-216ENST00000555542 RORAP35398 523 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 PMS2P54278 862 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 SLC5A12Q1EHB4 618 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 RNF187Q5TA31 235 aaPredicted RBP23.6■■□□□ 1.37
PRKCH-216ENST00000555542 TTC27Q6P3X3 843 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 ZNF517Q6ZMY9 492 aaPredicted RBP23.6■■□□□ 1.37
PRKCH-216ENST00000555542 TAX1BP1Q86VP1 789 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 RASGEF1CQ8N431 466 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 C2orf73Q8N5S3 287 aaPredicted RBP23.6■■□□□ 1.37
PRKCH-216ENST00000555542 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.6■■□□□ 1.37
PRKCH-216ENST00000555542 TP53TG5Q9Y2B4 290 aa23.6■■□□□ 1.37
PRKCH-216ENST00000555542 BOD1L1Q8NFC6 3051 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 SPTBP11277 2137 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 AVILO75366 819 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 SLCO2B1O94956 709 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 RAB40ALP0C0E4 278 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 FMO4P31512 558 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 IL10RAQ13651 578 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 ZIC1Q15915 447 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 KYNUQ16719 465 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 LCN10Q6JVE6 187 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 CCDC137Q6PK04 289 aaKnown RBP23.59■■□□□ 1.37
PRKCH-216ENST00000555542 RAB42Q8N4Z0 105 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 SLC22A18Q96BI1 424 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 FOPNLQ96NB1 174 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 NLNQ9BYT8 704 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 CLMPQ9H6B4 373 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 TSR3Q9UJK0 312 aaKnown RBP23.59■■□□□ 1.37
PRKCH-216ENST00000555542 ANAPC2Q9UJX6 822 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 MRFAP1Q9Y605 127 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 AP1M2Q9Y6Q5 423 aa23.59■■□□□ 1.37
PRKCH-216ENST00000555542 HELZ2Q9BYK8 2649 aaKnown RBP23.58■■□□□ 1.37
PRKCH-216ENST00000555542 PGRMC1O00264 195 aaKnown RBP23.58■■□□□ 1.37
PRKCH-216ENST00000555542 CD9P21926 228 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 ARNTP27540 789 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 PEBP1P30086 187 aaKnown RBP23.58■■□□□ 1.37
PRKCH-216ENST00000555542 TLE1Q04724 770 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 KIAA0930Q6ICG6 404 aaPredicted RBP23.58■■□□□ 1.37
PRKCH-216ENST00000555542 FAM20CQ8IXL6 584 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 FLVCR1-AS1Q8TAF5 88 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 IL17FQ96PD4 163 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 DPH2Q9BQC3 489 aaPredicted RBP23.58■■□□□ 1.37
PRKCH-216ENST00000555542 RAB11FIP5Q9BXF6 653 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 GRPEL1Q9HAV7 217 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 ACSS2Q9NR19 701 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 TLK1Q9UKI8 766 aa23.58■■□□□ 1.37
PRKCH-216ENST00000555542 GOLGA6L10A0A0M3HER8 536 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 ARGFXA6NJG6 315 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 GOLGA8MH3BSY2 632 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 ZSCAN12O43309 604 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 DNAJB5O75953 348 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 COILP38432 576 aaPredicted RBP23.57■■□□□ 1.36
PRKCH-216ENST00000555542 CTSL3PQ5NE16 218 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 ANKRD22Q5VYY1 191 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 CNSTQ6PJW8 725 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 SLC35F6Q8N357 371 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 LMNTD1Q8N9Z9 388 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 OR2L8Q8NGY9 312 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 RAD51AP1Q96B01 352 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 ZNF669Q96BR6 464 aaPredicted RBP23.57■■□□□ 1.36
PRKCH-216ENST00000555542 FAM136AQ96C01 138 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 SPRTNQ9H040 489 aaPredicted RBP23.57■■□□□ 1.36
PRKCH-216ENST00000555542 TXLNGQ9NUQ3 528 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 INTS7Q9NVH2 962 aaKnown RBP23.57■■□□□ 1.36
PRKCH-216ENST00000555542 GPN3Q9UHW5 284 aaPredicted RBP23.57■■□□□ 1.36
PRKCH-216ENST00000555542 TCFL5Q9UL49 500 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 PADI2Q9Y2J8 665 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 CRYL1Q9Y2S2 319 aa23.57■■□□□ 1.36
PRKCH-216ENST00000555542 BSNQ9UPA5 3926 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 H3BMM5 538 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 RASGRF2O14827 1237 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 ZSCAN9O15535 394 aaPredicted RBP23.56■■□□□ 1.36
PRKCH-216ENST00000555542 S1PR4O95977 384 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 CHRM3P20309 590 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 NR1D1P20393 614 aa23.56■■□□□ 1.36
PRKCH-216ENST00000555542 MAGP20916 626 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms