RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 TCAIMQ8N3R3 496 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 RASGEF1AQ8N9B8 481 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 PHOSPHO2Q8TCD6 241 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 GTF2H4Q92759 462 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 ZFYVE19Q96K21 471 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 TMEM106CQ9BVX2 250 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 DLGAP4Q9Y2H0 992 aa23.68■■□□□ 1.38
TMEM260-207ENST00000555497 SAC3D1A6NKF1 404 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SLC16A5O15375 505 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 TULP3O75386 442 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SLCO2B1O94956 709 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 KRT6AP02538 564 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 KRT6BP04259 564 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SRPRAP08240 638 aaKnown RBP23.67■■□□□ 1.38
TMEM260-207ENST00000555497 BCKDHAP12694 445 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 IL10P22301 178 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 KRT6CP48668 564 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SP140Q13342 867 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 ADGRD2Q7Z7M1 963 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 EPHX4Q8IUS5 362 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 TRPV3Q8NET8 790 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SLC13A3Q8WWT9 602 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 ZSCAN5AQ9BUG6 496 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 DPY30Q9C005 99 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 ASIC5Q9NY37 505 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 NFKBIL1Q9UBC1 381 aaPredicted RBP23.67■■□□□ 1.38
TMEM260-207ENST00000555497 TCF20Q9UGU0 1960 aaKnown RBP23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SLC8A2Q9UPR5 921 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 ARHGAP10A1A4S6 786 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 PRRT4C9JH25 899 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 TSPAN6O43657 245 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 AP2A2O94973 939 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 PEX19P40855 299 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SLC6A11P48066 632 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 HNMTP50135 292 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 C11orf91Q3C1V1 193 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 ZBTB49Q6ZSB9 765 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 PIP4K2CQ8TBX8 421 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 OSCP1Q8WVF1 389 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 SELENOMQ8WWX9 145 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 GBP5Q96PP8 586 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 PIDD1Q9HB75 910 aa23.67■■□□□ 1.38
TMEM260-207ENST00000555497 LRRK1Q38SD2 2015 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 MYOCOSA0A1B0GUC4 107 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 OTOL1A6NHN0 477 aaPredicted RBP23.66■■□□□ 1.38
TMEM260-207ENST00000555497 AREL1O15033 823 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 KPNA5O15131 536 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 SPINT1O43278 529 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 CYP2A7P20853 494 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 PFN3P60673 137 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 ABRQ12979 859 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 GGTA1PQ4G0N0 100 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 CACHD1Q5VU97 1274 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 PPP4R4Q6NUP7 873 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 UBE2Q1Q7Z7E8 422 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 CHERPQ8IWX8 916 aaKnown RBP23.66■■□□□ 1.38
TMEM260-207ENST00000555497 L3MBTL4Q8NA19 623 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 MCOLN3Q8TDD5 553 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 ASZ1Q8WWH4 475 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 BIRC7Q96CA5 298 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 ZBTB18Q99592 522 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 WRAP53Q9BUR4 548 aaKnown RBP23.66■■□□□ 1.38
TMEM260-207ENST00000555497 CLMPQ9H6B4 373 aa23.66■■□□□ 1.38
TMEM260-207ENST00000555497 NUP210Q8TEM1 1887 aaPredicted RBP23.66■■□□□ 1.38
TMEM260-207ENST00000555497 HOXC11O43248 304 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 GPIP06744 558 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 VASPP50552 380 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 ACOX1Q15067 660 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 NEK10Q6ZWH5 1172 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 RAVER1Q8IY67 606 aaKnown RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 GLYATL1Q969I3 302 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 ARHGEF33A8MVX0 844 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 GRXCR1A8MXD5 290 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 PDLIM1O00151 329 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 KPNA3O00505 521 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 FTH1P02794 183 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 ELFN1P0C7U0 828 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 EN2P19622 333 aaPredicted RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 PREPP48147 710 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 PHC1P78364 1004 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 ZNF284Q2VY69 593 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 PRR23BQ6ZRT6 265 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 SFTPA1Q8IWL2 248 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 MSRB3Q8IXL7 192 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 RNF175Q8N4F7 328 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 SMG7Q92540 1137 aaKnown RBP23.65■■□□□ 1.38
TMEM260-207ENST00000555497 LRIG1Q96JA1 1093 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 DNAJC11Q9NVH1 559 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 RWDD3Q9Y3V2 267 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 PCDHB3Q9Y5E6 796 aa23.65■■□□□ 1.38
TMEM260-207ENST00000555497 KCNH1O95259 989 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 ASLP04424 464 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 HLA-EP13747 358 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 FASP25445 335 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 GAB4Q2WGN9 574 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 CCSMST1Q4G0I0 132 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 GLYATQ6IB77 296 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 IYDQ6PHW0 289 aa23.64■■□□□ 1.38
TMEM260-207ENST00000555497 TMC5Q6UXY8 1006 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms