RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 MLIPQ5VWP3 458 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 MRPL14Q6P1L8 145 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 MRGPREQ86SM8 312 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 HPS6Q86YV9 775 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 FAM20CQ8IXL6 584 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 TAB3Q8N5C8 712 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 LMNTD1Q8N9Z9 388 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 TTC13Q8NBP0 860 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 OR52K1Q8NGK4 314 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 ELMO1Q92556 727 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 HDAC10Q969S8 669 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 ZNF778Q96MU6 729 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 MENTQ9BUN1 341 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 SLC7A5P2Q9GIP4 190 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 ZNF552Q9H707 407 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 OR6C2Q9NZP2 312 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 C5AR2Q9P296 337 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 DHCR7Q9UBM7 475 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 PLEKHB1Q9UF11 243 aaPredicted RBP11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 SLC2A6Q9UGQ3 507 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 POLG2Q9UHN1 485 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 AMFRQ9UKV5 643 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 PLAGL1Q9UM63 463 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 CDYLQ9Y232 598 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 TDRKHQ9Y2W6 561 aaKnown RBP11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 AP1M2Q9Y6Q5 423 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 MYO7BQ6PIF6 2116 aa11.78□□□□□ -0.52
MTHFD1-207ENST00000554677 A0A0J9YY10 115 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 C9J4A7 227 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 KRT86O43790 486 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 ZNF189O75820 626 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 FTH1P02794 183 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 UMODP07911 640 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 ITGAXP20702 1163 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 CCR7P32248 378 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 DCDP81605 110 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 GRB7Q14451 532 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 SLC5A12Q1EHB4 618 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 DCAF10Q5QP82 559 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 VWA5B1Q5TIE3 1220 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 ZNF534Q76KX8 674 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 PPP1R32Q7Z5V6 425 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 RAB43Q86YS6 212 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 TMEM139Q8IV31 216 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 VRK3Q8IV63 474 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 PARP9Q8IXQ6 854 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 GPR135Q8IZ08 494 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 ZNF655Q8N720 491 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 LINC01555Q8NAE3 123 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 LKAAEAR1Q8TD35 194 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 SSC4DQ8WTU2 575 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 INPP5DQ92835 1189 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 SNRNP40Q96DI7 357 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 SGSM3Q96HU1 749 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 ETNK1Q9HBU6 452 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 ZBTB20Q9HC78 741 aaPredicted RBP11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 SLAMF7Q9NQ25 335 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 KLHL20Q9Y2M5 609 aa11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 PTRH2Q9Y3E5 179 aaKnown RBP11.77□□□□□ -0.53
MTHFD1-207ENST00000554677 GOLGA6L9A6NEM1 432 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 WIPF3A6NGB9 483 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 QSOX1O00391 747 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 ZSCAN9O15535 394 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 GPC4O75487 556 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 SUN1O94901 812 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 CBX6O95503 412 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 ONECUT2O95948 504 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 FTCDO95954 541 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 GOT2P00505 430 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 PKLRP30613 574 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 SOX8P57073 446 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 ACVR1Q04771 509 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 SEMA3AQ14563 771 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 SLC9A5Q14940 896 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 KIR2DS3Q14952 304 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 OASLQ15646 514 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 KYNUQ16719 465 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 P3H1Q32P28 736 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 NKAIN1Q4KMZ8 207 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 TSTD2Q5T7W7 516 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 TLDC1Q6P9B6 456 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 IGFL3Q6UXB1 125 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 PEX26Q7Z412 305 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 OR2Y1Q8NGV0 311 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 PROKR1Q8TCW9 393 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 ATG4AQ8WYN0 398 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 LRRC45Q96CN5 670 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 MRFAP1L1Q96HT8 127 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 HES6Q96HZ4 224 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 IP6K3Q96PC2 410 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 RANBP9Q96S59 729 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 BARD1Q99728 777 aaKnown RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 AP1M1Q9BXS5 423 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 CUEDC1Q9NWM3 386 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 P4HTMQ9NXG6 502 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 IFT80Q9P2H3 777 aaPredicted RBP11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 IMPACTQ9P2X3 320 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 RIMKLBQ9ULI2 386 aa11.76□□□□□ -0.53
MTHFD1-207ENST00000554677 PLCL2Q9UPR0 1127 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms