RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 HSP90AA5PQ58FG0 334 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 ZNF789Q5FWF6 425 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 HP1BP3Q5SSJ5 553 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PLEKHS1Q5SXH7 462 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PWWP2BQ6NUJ5 590 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 C16orf46Q6P387 395 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 UNC5DQ6UXZ4 953 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SYDE1Q6ZW31 735 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 CENPUQ71F23 418 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TMEM135Q86UB9 458 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 KCNMB4Q86W47 210 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 BPHLQ86WA6 291 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 PDIK1LQ8N165 341 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 ZBTB2Q8N680 514 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 GABPB2Q8TAK5 448 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 CALML6Q8TD86 181 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SNRNP27Q8WVK2 155 aaKnown RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 EXTL1Q92935 676 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SLCO2A1Q92959 643 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 CFAP36Q96G28 342 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 BIRC8Q96P09 236 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 IL17FQ96PD4 163 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 KRT12Q99456 494 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 TUBB2BQ9BVA1 445 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SPRY4Q9C004 299 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SLC7A5P2Q9GIP4 190 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 KCND1Q9NSA2 647 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 IARS2Q9NSE4 1012 aaKnown RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 INTS10Q9NVR2 710 aaKnown RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 IRAK4Q9NWZ3 460 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SPHK1Q9NYA1 384 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 OR6C2Q9NZP2 312 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-213ENST00000554600 CDYLQ9Y232 598 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 NFS1Q9Y697 457 aa10.32□□□□□ -0.76
SHMT2-213ENST00000554600 SCN2AQ99250 2005 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 A0A0J9YY10 115 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 ZCWPW2A0A1B0GU75 182 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 ZIC2O95409 532 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-213ENST00000554600 S1PR4O95977 384 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 ATXN8OSP0DMR3 200 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 CYP2A7P20853 494 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 PKLRP30613 574 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 SLC1A2P43004 574 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 RAB28P51157 221 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 MPP1Q00013 466 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 MAP7Q14244 749 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 CRYMQ14894 314 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 KYNUQ16719 465 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 TTLL9Q3SXZ7 439 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 AGGF1Q8N302 714 aaeCLIP10.31□□□□□ -0.76
SHMT2-213ENST00000554600 RAB42Q8N4Z0 105 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 C19orf47Q8N9M1 422 aaKnown RBP10.31□□□□□ -0.76
SHMT2-213ENST00000554600 LMNTD1Q8N9Z9 388 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 OR8K5Q8NH50 307 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 STARD8Q92502 1023 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 MR1Q95460 341 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 RAD51AP1Q96B01 352 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 ZNF501Q96CX3 271 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-213ENST00000554600 CLIP3Q96DZ5 547 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 SNF8Q96H20 258 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 SLC45A3Q96JT2 553 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 FCRL4Q96PJ5 515 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 TRAPPC9Q96Q05 1148 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 FAM167BQ9BTA0 163 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 SLC12A9Q9BXP2 914 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 PITPNM3Q9BZ71 974 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 PPANQ9NQ55 473 aaKnown RBP10.31□□□□□ -0.76
SHMT2-213ENST00000554600 RNF14Q9UBS8 474 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 IL17BQ9UHF5 180 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 CROTQ9UKG9 612 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 FBXO5Q9UKT4 447 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 PADI1Q9ULC6 663 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 CHMP2BQ9UQN3 213 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 MRFAP1Q9Y605 127 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 MRPS18BQ9Y676 258 aaKnown RBP10.31□□□□□ -0.76
SHMT2-213ENST00000554600 FAM169AQ9Y6X4 670 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 SCN3AQ9NY46 2000 aa10.31□□□□□ -0.76
SHMT2-213ENST00000554600 ATMQ13315 3056 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 TNRC6AQ8NDV7 1962 aaKnown RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 EFCAB8A8MWE9 144 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 NKX2-8O15522 239 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 CPNE3O75131 537 aaKnown RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 TTC4O95801 387 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 TPBGLP0DKB5 382 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 ERVK-10P10266 1014 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 TCN2P20062 427 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 CD9P21926 228 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 CCNFP41002 786 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 ITGA8P53708 1063 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 ADARP55265 1226 aaKnown RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 MRPS25P82663 173 aaKnown RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 MC1RQ01726 317 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 TSTA3Q13630 321 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-213ENST00000554600 KIR2DS3Q14952 304 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 MORF4L2Q15014 288 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 HIF1AQ16665 826 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 DEFB110Q30KQ9 67 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 MSS51Q4VC12 460 aa10.3□□□□□ -0.76
SHMT2-213ENST00000554600 SPANXN3Q5MJ09 141 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms