RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CENPSQ8N2Z9 138 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 C10orf53Q8N6V4 93 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FAM71DQ8N9W8 422 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 Q8NA96 180 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ICA1LQ8NDH6 482 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 VANGL1Q8TAA9 524 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 AENQ8WTP8 325 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SMG7Q92540 1137 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PHF21AQ96BD5 680 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PTERQ96BW5 349 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SLC25A36Q96CQ1 311 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ERLEC1Q96DZ1 483 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PDXPQ96GD0 296 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 VCPIP1Q96JH7 1222 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF778Q96MU6 729 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 C7orf26Q96N11 449 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF641Q96N77 438 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SERPINB12Q96P63 405 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FAM111AQ96PZ2 611 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 NUP88Q99567 741 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TXN2Q99757 166 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TDRD1Q9BXT4 1180 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FRMD8Q9BZ67 464 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 OR2B2Q9GZK3 357 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TWSG1Q9GZX9 223 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 DDX47Q9H0S4 455 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PABPC3Q9H361 631 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 OSGEPL1Q9H4B0 414 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 GSTO2Q9H4Y5 243 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 DHX33Q9H6R0 707 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 UBE2ZQ9H832 354 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SIAEQ9HAT2 523 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RAVER2Q9HCJ3 691 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MRPS30Q9NP92 439 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 TIGARQ9NQ88 270 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SERINC1Q9NRX5 453 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 OLA1Q9NTK5 396 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RRN3Q9NYV6 651 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 KLHL9Q9P2J3 617 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 RCOR3Q9P2K3 495 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ANKMY1Q9P2S6 941 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CPNE7Q9UBL6 633 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 ADD3Q9UEY8 706 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 LIMA1Q9UHB6 759 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 IL19Q9UHD0 177 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 C19orf53Q9UNZ5 99 aaPredicted RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PPP2R2CQ9Y2T4 447 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 SAMHD1Q9Y3Z3 626 aaKnown RBP4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PCDHGA1Q9Y5H4 931 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 MAD1L1Q9Y6D9 718 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 FLT1P17948 1338 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 CFAP47Q6ZTR5 3102 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 PARP14Q460N5 1801 aa4.35□□□□□ -1.71
ATXN3-227ENST00000554491 GPR179Q6PRD1 2367 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TRGV11A0A075B6L2 103 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MTMR11A4FU01 709 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 RGSL1A5PLK6 1076 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 KRT87PA6NCN2 255 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 WIPF3A6NGB9 483 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 LRRC14BA6NHZ5 514 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SLC15A5A6NIM6 579 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PROB1E7EW31 1015 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 K7EPI3 171 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TXNDC9O14530 226 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 VILLO15195 856 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PPM1DO15297 605 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TP73O15350 636 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 YY2O15391 372 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SMPD2O60906 423 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 KERAO60938 352 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SULT1C4O75897 302 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 RASAL1O95294 804 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 EYA4O95677 639 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 WDPCPO95876 746 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DHFRP00374 187 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 AMY1AP04745 511 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 IGKV5-2P06315 115 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CA3P07451 260 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 KRT19P08727 400 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CPEP16870 476 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NCF2P19878 526 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DRD4P21917 467 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 KCNA5P22460 613 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 TNFRSF8P28908 595 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 PDHA2P29803 388 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 RFC1P35251 1148 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 NUP62P37198 522 aaPredicted RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 GSTM5P46439 218 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 OR3A3P47888 321 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF81P51508 661 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SLC7A2P52569 658 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CDH6P55285 790 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 DCDC1P59894 354 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CDK16Q00536 496 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 SRSF2Q01130 221 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 CKAP4Q07065 602 aaKnown RBP4.34□□□□□ -1.71
ATXN3-227ENST00000554491 MALLQ13021 153 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 FADDQ13158 208 aa4.34□□□□□ -1.71
ATXN3-227ENST00000554491 ZNF177Q13360 481 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms