RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 SLC4A1P02730 911 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 JUNP05412 331 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 UQCRHP07919 91 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 C1SP09871 688 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CYP2A6P11509 494 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TDGF1P13385 188 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 GM2AP17900 193 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 MCM3P25205 808 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 NMBRP28336 390 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 MAGEA4P43358 317 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CXCL12P48061 93 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 PXNP49023 591 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TPMTP51580 245 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CCR3P51677 355 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ADPRHP54922 357 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 GPX6P59796 221 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 FAM193AP78312 1265 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 DMWDQ09019 674 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ELP6Q0PNE2 266 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 RIN1Q13671 783 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 PTPRCAPQ14761 206 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 BRD3Q15059 726 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CNGA3Q16281 694 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TTC31Q49AM3 519 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TMEM52BQ4KMG9 183 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ANKRD20A4Q4UJ75 823 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TSTD2Q5T7W7 516 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 LCE5AQ5TCM9 118 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ARMC3Q5W041 872 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 STEAP4Q687X5 459 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 LRRC66Q68CR7 880 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CASC4Q6P4E1 433 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CES3Q6UWW8 571 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 GLT6D1Q7Z4J2 308 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 HSD11B1LQ7Z5J1 315 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TMEM135Q86UB9 458 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ZBED8Q8IZ13 594 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 MAML2Q8IZL2 1156 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 NDUFAF2Q8N183 169 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TMEM105Q8N8V8 129 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 FBXO36Q8NEA4 188 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 PPHLN1Q8NEY8 458 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 OR13J1Q8NGT2 312 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 GANCQ8TET4 914 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 PYROXD1Q8WU10 500 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 STYXQ8WUJ0 223 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CAVIN3Q969G5 261 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 DNAJC1Q96KC8 554 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 C9orf72Q96LT7 481 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 COQ10AQ96MF6 247 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 LRRC37BQ96QE4 947 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 LMF1Q96S06 567 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 OMDQ99983 421 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 WRAP53Q9BUR4 548 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CDC42EP4Q9H3Q1 356 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 EPHX3Q9H6B9 360 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 PRMT8Q9NR22 394 aaPredicted RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CHRAC1Q9NRG0 131 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 TREX1Q9NSU2 369 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 NINJ2Q9NZG7 142 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 IL17CQ9P0M4 197 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 RIMKLBQ9ULI2 386 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 FZD4Q9ULV1 537 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ZFR2Q9UPR6 939 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 MAD1L1Q9Y6D9 718 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.24□□□□□ -1.41
SCFD1-212ENST00000554486 CEP192Q8TEP8 1941 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 PLXNB3Q9ULL4 1909 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ZNF318Q5VUA4 2279 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 KMT2EQ8IZD2 1858 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 KNL1Q8NG31 2342 aa6.24□□□□□ -1.41
SCFD1-212ENST00000554486 ZCWPW2A0A1B0GU75 182 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 MAGEB16A2A368 324 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 HEATR9A2RTY3 570 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CCDC151A5D8V7 595 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 IGLON5A6NGN9 336 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CCDC154A6NI56 674 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 C2orf81A6NN90 581 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CCL22O00626 93 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 GAPDHSO14556 408 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 USP1O94782 785 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 TTC4O95801 387 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ACADMP11310 421 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 C6P13671 934 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 H2AFXP16104 143 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ZNF30P17039 623 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 PGAM1P18669 254 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 LPOP22079 712 aaPredicted RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 SSTR1P30872 391 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 HOXA6P31267 233 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ACSL1P33121 698 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CASRP41180 1078 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ARCN1P48444 511 aaKnown RBP6.23□□□□□ -1.41
SCFD1-212ENST00000554486 SPINT3P49223 89 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 PMS2P54278 862 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 ACVR1Q04771 509 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CCDC15Q0P6D6 951 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 LAMB3Q13751 1172 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 FGL2Q14314 439 aa6.23□□□□□ -1.41
SCFD1-212ENST00000554486 CRYMQ14894 314 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms