RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 PI4K2BG5E9Z4 385 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 RTCAO00442 366 aaKnown RBP4.64□□□□□ -1.67
SCFD1-211ENST00000554437 UBXN2AP68543 259 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 CBWD6Q4V339 395 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 CBWD3Q5JTY5 395 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 RNASEH2BQ5TBB1 312 aaKnown RBP4.64□□□□□ -1.67
SCFD1-211ENST00000554437 IL27RAQ6UWB1 636 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 LINGO4Q6UY18 593 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 TMPRSS11FQ6ZWK6 438 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 RAPH1Q70E73 1250 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 OR10S1Q8NGN2 331 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 TMEM143Q96AN5 459 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 SPACA9Q96E40 222 aaPredicted RBP4.64□□□□□ -1.67
SCFD1-211ENST00000554437 NSL1Q96IY1 281 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 DGAT2Q96PD7 388 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 VN1R1Q9GZP7 353 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 C2orf40Q9H1Z8 148 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 SLC52A3Q9NQ40 469 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 EQTNQ9NQ60 294 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 PDRG1Q9NUG6 133 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 WDR35Q9P2L0 1181 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 EPS15L1Q9UBC2 864 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 OSGIN1Q9UJX0 560 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 GTF3C4Q9UKN8 822 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 GAB2Q9UQC2 676 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 C2CD2Q9Y426 696 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 KNSTRNQ9Y448 316 aa4.64□□□□□ -1.67
SCFD1-211ENST00000554437 UBE2CO00762 179 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 MEIS2O14770 477 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 OR2T7P0C7T2 308 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 CFC1BP0CG36 223 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 CFC1P0CG37 223 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 THEGLP0DJG4 465 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 CHRNB4P30926 498 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 HNF4AP41235 474 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 GLIPR1P48060 266 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 SLC9A3P48764 834 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 CX3CL1P78423 397 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 LGALS3BPQ08380 585 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 DMPKQ09013 629 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 SLFN11Q7Z7L1 901 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 ISCA2Q86U28 154 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 CFAP206Q8IYR0 622 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 NUP93Q8N1F7 819 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 NAT8LQ8N9F0 302 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 POMGNT2Q8NAT1 580 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 TSPAN14Q8NG11 270 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 OR1J1Q8NGS3 322 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 CFAP61Q8NHU2 1237 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 SENP5Q96HI0 755 aaPredicted RBP4.63□□□□□ -1.67
SCFD1-211ENST00000554437 BTBD10Q9BSF8 475 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 ABCG4Q9H172 646 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 TRPV4Q9HBA0 871 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 STK26Q9P289 416 aa4.63□□□□□ -1.67
SCFD1-211ENST00000554437 GAPDHSO14556 408 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-211ENST00000554437 SLC22A2O15244 555 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 SLC7A4O43246 635 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 MT-ND3P03897 115 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 QDPRP09417 244 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 ERVK-10P10266 1014 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 PFKFB1P16118 471 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 HOXC8P31273 242 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 HPDP32754 393 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-211ENST00000554437 BFSP1Q12934 665 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 RBM39Q14498 530 aaKnown RBP4.62□□□□□ -1.67
SCFD1-211ENST00000554437 COG2Q14746 738 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 PTPN14Q15678 1187 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 KIAA1644Q3SXP7 199 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF876PQ49A33 203 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 DCAF10Q5QP82 559 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 C6orf163Q5TEZ5 329 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 BTN2A1Q7KYR7 527 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF595Q8IYB9 648 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.62□□□□□ -1.67
SCFD1-211ENST00000554437 POGLUT1Q8NBL1 392 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 OR13J1Q8NGT2 312 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 SPATA3Q8NHX4 192 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 HSD17B8Q92506 261 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 NXNL1Q96CM4 212 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 FSD1Q9BTV5 496 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 WNT5BQ9H1J7 359 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 ARRDC1-AS1Q9H2J1 176 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 TSPY26PQ9H489 355 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 ZNF696Q9H7X3 374 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 ERVMER34-1Q9H9K5 563 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 SCRT2Q9NQ03 307 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 DDX43Q9NXZ2 648 aaKnown RBP4.62□□□□□ -1.67
SCFD1-211ENST00000554437 DPP3Q9NY33 737 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 HAO2Q9NYQ3 351 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 MDFICQ9P1T7 246 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 DDX25Q9UHL0 483 aaKnown RBP4.62□□□□□ -1.67
SCFD1-211ENST00000554437 TUBE1Q9UJT0 475 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 NME7Q9Y5B8 376 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 TRPV2Q9Y5S1 764 aa4.62□□□□□ -1.67
SCFD1-211ENST00000554437 TRIM64CA6NLI5 447 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 DNM1LO00429 736 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 OR10H2O60403 315 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 B3GALNT1O75752 331 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 GOSR1O95249 250 aa4.61□□□□□ -1.67
SCFD1-211ENST00000554437 PIGNO95427 931 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms