RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 MS4A4AQ96JQ5 239 aa16.59■□□□□ 0.25
PPP4R3A-202ENST00000554390 POLR3HQ9Y535 204 aaPredicted RBP16.59■□□□□ 0.25
PPP4R3A-202ENST00000554390 ORC6Q9Y5N6 252 aa16.59■□□□□ 0.25
PPP4R3A-202ENST00000554390 ARVCFO00192 962 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 CCRL2O00421 344 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 HAT1O14929 419 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 PGLSO95336 258 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 SLC26A3P40879 764 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 KCNQ1P51787 676 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 PRKG2Q13237 762 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 CDK10Q15131 360 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 SYT16Q17RD7 645 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 ATP6AP1LQ52LC2 224 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 GNASQ5JWF2 1037 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 SNAP47Q5SQN1 464 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 PNCKQ6P2M8 343 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 PEX5LQ8IYB4 626 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 BEND7Q8N7W2 519 aaPredicted RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 PSD4Q8NDX1 1056 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 OR10A6Q8NH74 314 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 DEPDC7Q96QD5 511 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 TMEM246Q9BRR3 403 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 FARSBQ9NSD9 589 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 TNFRSF10BO14763 440 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 DBTP11182 482 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 JUNDP17535 347 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 ENDOUP21128 410 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 OR2B6P58173 313 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 HMGCS1Q01581 520 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 RFTN2Q52LD8 501 aaPredicted RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 C6orf136Q5SQH8 315 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZCCHC8Q6NZY4 707 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 Q6ZSR9 355 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZFAND4Q86XD8 727 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 SUN5Q8TC36 379 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 ELMO1Q92556 727 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 ACBD6Q9BR61 282 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 THUMPD3Q9BV44 507 aaKnown RBP16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 A0A0C4DFX4 3053 aa16.58■□□□□ 0.24
PPP4R3A-202ENST00000554390 MN1Q10571 1320 aaPredicted RBP16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 SLC12A8A0AV02 714 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 RGS10O43665 173 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 TLR5O60602 858 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 RAMP2O60895 175 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 CAPN1P07384 714 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 THPOP40225 353 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 PBX3P40426 434 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 HTR3AP46098 478 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 GNG2P59768 71 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ERVPABLB-1P60509 514 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 FADDQ13158 208 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 C10orf120Q5SQS8 335 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 MRNIPQ6NTE8 343 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 LINGO4Q6UY18 593 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ADHFE1Q8IWW8 467 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 DPP10Q8N608 796 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 OR2T12Q8NG77 320 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 DMRTB1Q96MA1 342 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 AARSD1Q9BTE6 412 aaKnown RBP16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZYG11BQ9C0D3 744 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 GORASP2Q9H8Y8 452 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ATP13A1Q9HD20 1204 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 FBXL12Q9NXK8 326 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 QPCTLQ9NXS2 382 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZIM2Q9NZV7 527 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 VAPAQ9P0L0 249 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 CDH23Q9H251 3354 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 KRT87PA6NCN2 255 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 CLDN24A6NM45 220 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 A8MV72 311 aaPredicted RBP16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 UPK3BL1B0FP48 263 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 UPK3BL2E5RIL1 263 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 M0QZ92 97 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZW10O43264 779 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 DIRAS1O95057 198 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 MRPL19P49406 292 aaKnown RBP16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 STC1P52823 247 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 NR6A1Q15406 480 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZFP69Q49AA0 526 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZRANB3Q5FWF4 1079 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 BRMS1LQ5PSV4 323 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZNF544Q6NX49 715 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 C11orf74Q86VG3 221 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 FAM126BQ8IXS8 530 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 C10orf111Q8N326 155 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 MDGA1Q8NFP4 955 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 MED30Q96HR3 178 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 HCSTQ9UBK5 93 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 FKBPLQ9UIM3 349 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 PADI3Q9ULW8 664 aa16.57■□□□□ 0.24
PPP4R3A-202ENST00000554390 CENPXA8MT69 81 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 NDUFS3O75489 264 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 ABCB1P08183 1280 aaPredicted RBP16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 ERVK-8P63133 956 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 TUBA1BP68363 451 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 MRPS6P82932 125 aaKnown RBP16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 ZNF45Q02386 682 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 TUBA1AQ71U36 451 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 ANKRD46Q86W74 232 aa16.56■□□□□ 0.24
PPP4R3A-202ENST00000554390 SETD9Q8NE22 299 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms