RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 ILF3Q12906 894 aaKnown RBP eCLIP4.82□□□□□ -1.64
CHD8-207ENST00000554384 PPIGQ13427 754 aaKnown RBP eCLIP4.82□□□□□ -1.647e-6■■□□□ 12.3
CHD8-207ENST00000554384 ZNF273Q14593 569 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 ASIC2Q16515 512 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 CAPRIN2Q6IMN6 1127 aaKnown RBP4.82□□□□□ -1.64
CHD8-207ENST00000554384 CAVIN1Q6NZI2 390 aaKnown RBP4.82□□□□□ -1.64
CHD8-207ENST00000554384 CORO6Q6QEF8 472 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 FAM219AQ8IW50 185 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 CFAP206Q8IYR0 622 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 CCAR2Q8N163 923 aaKnown RBP4.82□□□□□ -1.64
CHD8-207ENST00000554384 ARSGQ96EG1 525 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 STAMBPL1Q96FJ0 436 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 ABHD8Q96I13 439 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 PSD2Q9BQI7 771 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 S1PR5Q9H228 398 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 FZD8Q9H461 694 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 APOBEC3GQ9HC16 384 aaKnown RBP4.82□□□□□ -1.64
CHD8-207ENST00000554384 A4GALTQ9NPC4 353 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 DPP3Q9NY33 737 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 DONSONQ9NYP3 566 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 IL17BQ9UHF5 180 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 MTUS1Q9ULD2 1270 aa4.82□□□□□ -1.64
CHD8-207ENST00000554384 ZNF142P52746 1687 aaPredicted RBP4.81□□□□□ -1.64
CHD8-207ENST00000554384 A0A1W2PPQ1 181 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 MED19A0JLT2 244 aaPredicted RBP4.81□□□□□ -1.64
CHD8-207ENST00000554384 C16orf97H3BN30 126 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 SYNGR3O43761 229 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 RECQL5O94762 991 aaPredicted RBP4.81□□□□□ -1.64
CHD8-207ENST00000554384 WDPCPO95876 746 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 IGHV4-39P01824 125 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 CD22P20273 847 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 JAK1P23458 1154 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 HSPA4P34932 840 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 CRKLP46109 303 aaKnown RBP4.81□□□□□ -1.64
CHD8-207ENST00000554384 SLC9A3P48764 834 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 TFCP2Q12800 502 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 PLA2G4FQ68DD2 849 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 NUP54Q7Z3B4 507 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 ARHGAP22Q7Z5H3 698 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 NAGSQ8N159 534 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 MAB21L3Q8N8X9 362 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 C9orf106Q8NAJ2 232 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 SPSB1Q96BD6 273 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 ALG14Q96F25 216 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 MUS81Q96NY9 551 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 CPNE1Q99829 537 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 BTBD10Q9BSF8 475 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 SLC25A23Q9BV35 468 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 KATNB1Q9BVA0 655 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 LRWD1Q9UFC0 647 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 ZNF112Q9UJU3 913 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 ABT1Q9ULW3 272 aaKnown RBP4.81□□□□□ -1.64
CHD8-207ENST00000554384 DNMT1P26358 1616 aaKnown RBP4.81□□□□□ -1.64
CHD8-207ENST00000554384 RAPGEF6Q8TEU7 1601 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 ZNF518AQ6AHZ1 1483 aa4.81□□□□□ -1.64
CHD8-207ENST00000554384 SUPT6HQ7KZ85 1726 aaKnown RBP4.8□□□□□ -1.64
CHD8-207ENST00000554384 TMEM94Q12767 1356 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 ROBO1Q9Y6N7 1651 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 PCDH11YQ9BZA8 1340 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 IGLV5-45A0A087WSX0 123 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 A0A1B0GUV1 79 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 OR6C76A6NM76 312 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 E9PI62 339 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 RAB40ALP0C0E4 278 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 TCF4P15884 667 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 ITGB6P18564 788 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 TLX1P31314 330 aaPredicted RBP4.8□□□□□ -1.64
CHD8-207ENST00000554384 DVL1P1P54792 670 aaPredicted RBP4.8□□□□□ -1.64
CHD8-207ENST00000554384 UBASH3AP57075 661 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 ERVFC1-1P60608 527 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 ZNF415Q09FC8 603 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 ARL16Q0P5N6 197 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 MFAP5Q13361 173 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 SYT14P1Q58G82 188 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 PDSS1Q5T2R2 415 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 C1QTNF12Q5T7M4 302 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 LCE1AQ5T7P2 110 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 MFSD12Q6NUT3 480 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 FOXL2NBQ6ZUU3 175 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 C9orf139Q6ZV77 190 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 DET1Q7L5Y6 550 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 TMEM139Q8IV31 216 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 MFN1Q8IWA4 741 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 THNSL1Q8IYQ7 743 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 FAM9BQ8IZU0 186 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 TTC30BQ8N4P2 665 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 NKAIN3Q8N8D7 197 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 TRIML1Q8N9V2 468 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 SLC24A4Q8NFF2 622 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 GOT1L1Q8NHS2 421 aaPredicted RBP4.8□□□□□ -1.64
CHD8-207ENST00000554384 SSMEM1Q8WWF3 244 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 LMLNQ96KR4 655 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 FEVQ99581 238 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 SEPHS2Q99611 448 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 LRRC1Q9BTT6 524 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 EDEM3Q9BZQ6 932 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 GRPEL1Q9HAV7 217 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 SERINC1Q9NRX5 453 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 GRIP1Q9Y3R0 1128 aa4.8□□□□□ -1.64
CHD8-207ENST00000554384 JRKLQ9Y4A0 524 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms