RNA–Protein interactions for RNA: ENST00000554062.5

PABPN1-204, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 3

Gene PABPN1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-204ENST00000554062 CCKBRP32239 447 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 AHRP35869 848 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 IER3P46695 156 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 NT5C2P49902 561 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 MMP15P51511 669 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 PDX1P52945 283 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 MFAP3P55082 362 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 INHBEP58166 350 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 KIAA1024LP59773 190 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 HNRNPKP61978 463 aaKnown RBP eCLIP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 POLR2LP62875 67 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 COG7P83436 770 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 ACTN3Q08043 901 aaPredicted RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 Q0VFX4 171 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 TNK1Q13470 666 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 DHX34Q14147 1143 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 NPTX1Q15818 432 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 GRTP1Q5TC63 336 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 ETFRF1Q6IPR1 90 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 TATDN1Q6P1N9 297 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 COMMD2Q86X83 199 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 ERC1Q8IUD2 1116 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 ADHFE1Q8IWW8 467 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SRRM1Q8IYB3 904 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 GBGT1Q8N5D6 347 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 NAT8LQ8N9F0 302 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 TRIML1Q8N9V2 468 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 L3MBTL4Q8NA19 623 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SLC16A11Q8NCK7 471 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 NSMAFQ92636 917 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SNRNP40Q96DI7 357 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 HMCESQ96FZ2 354 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 PDLIM5Q96HC4 596 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 AK8Q96MA6 479 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SPATA33Q96N06 139 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 HNRNPABQ99729 332 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 C1QTNF7Q9BXJ2 289 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SLA2Q9H6Q3 261 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 MYNNQ9NPC7 610 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 IARS2Q9NSE4 1012 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SLCO1C1Q9NYB5 712 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 WNT16Q9UBV4 365 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SPIN1Q9Y657 262 aaPredicted RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 PLCH2O75038 1416 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 PRAG1Q86YV5 1406 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 ADAMTSL3P82987 1691 aa4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SPAG9O60271 1321 aaKnown RBP4.44□□□□□ -1.7
PABPN1-204ENST00000554062 SIGLEC1Q9BZZ2 1709 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 CDK13Q14004 1512 aaKnown RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 IGLV5-37A0A075B6J1 123 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 ZCWPW2A0A1B0GU75 182 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 A0A1B0GVT2 93 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 A0A1W2PPW3 197 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 KBTBD13C9JR72 458 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 DDHD2O94830 711 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 GH1P01241 217 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 UROSP10746 265 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 CORO1AP31146 461 aaKnown RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 RPL21P46778 160 aaKnown RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 RFX5P48382 616 aaPredicted RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 CLK1P49759 484 aaKnown RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 RGS7P49802 495 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 MAPK12P53778 367 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 ABATP80404 500 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 EGR4Q05215 589 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 CBX3Q13185 183 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 RABEP1Q15276 862 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 AMIGO1Q86WK6 493 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 C1orf87Q8N0U7 546 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 CPSF7Q8N684 471 aaKnown RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 PRR26Q8N8Z3 221 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 LPCAT1Q8NF37 534 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 SEMA4DQ92854 862 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 DAZLQ92904 295 aaKnown RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 STAMBPL1Q96FJ0 436 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 BSCL2Q96G97 398 aaPredicted RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 TMEM19Q96HH6 336 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 SGK494Q96LW2 274 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 SPXQ9BT56 116 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 PRRG4Q9BZD6 226 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 SCAND2PQ9GZW5 306 aaPredicted RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 MIS12Q9H081 205 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 MINDY3Q9H8M7 445 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 AKIRIN1Q9H9L7 192 aaPredicted RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 TMEM30AQ9NV96 361 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 CNIH4Q9P003 139 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 TROQ12816 1431 aaPredicted RBP4.43□□□□□ -1.7
PABPN1-204ENST00000554062 KDM5CP41229 1560 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 FYCO1Q9BQS8 1478 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 KIF14Q15058 1648 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 HECW1Q76N89 1606 aa4.43□□□□□ -1.7
PABPN1-204ENST00000554062 TRAV24A0A0B4J272 114 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 FEZF1A0PJY2 475 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 FAM86B1E9PN63 330 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 H3BNX3 289 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 WDR1O75083 606 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 RPS6KA5O75582 802 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 OLFM2O95897 454 aa4.42□□□□□ -1.7
PABPN1-204ENST00000554062 FAM86B2P0C5J1 330 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms