RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 OXSMQ9NWU1 459 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 SIRPGQ9P1W8 387 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 NCDNQ9UBB6 729 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 CPNE7Q9UBL6 633 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 IKZF3Q9UKT9 509 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 PCDHGB2Q9Y5G2 931 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 ST14Q9Y5Y6 855 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 CABIN1Q9Y6J0 2220 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 A0A0C4DFX4 3053 aa14.11□□□□□ -0.15
SHMT2-210ENST00000553950 NCF1BA6NI72 391 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 OR52A4PA6NMU1 304 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 NCF1CA8MVU1 366 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 TMEM114B3SHH9 223 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 KLF11O14901 512 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 YY2O15391 372 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 SDC3O75056 442 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 KATNA1O75449 491 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 GUCA1CO95843 209 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 LMNAP02545 664 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 SERPINE1P05121 402 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 CELA2BP08218 269 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 ZNF806P0C7X5 589 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 ERGP11308 486 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 MTHFD2P13995 350 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 NCF1P14598 390 aaPredicted RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 ALDH3A1P30838 453 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 RAB28P51157 221 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 WDR4P57081 412 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 UBE2IP63279 158 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 HHEXQ03014 270 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 MPP2Q14168 576 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 PLCL1Q15111 1095 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 PCBP2Q15366 365 aaKnown RBP eCLIP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 TCEA2Q15560 299 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 PFKFB4Q16877 469 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 C14orf28Q4W4Y0 310 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 KLHL35Q6PF15 583 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 C10orf107Q8IVU9 208 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 KLHDC8AQ8IYD2 350 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 TMEM151AQ8N4L1 468 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 OR4C6Q8NH72 309 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 LRRC8CQ8TDW0 803 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 SLC37A2Q8TED4 501 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 RHBDF1Q96CC6 855 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 MAGEB18Q96M61 343 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 GTPBP2Q9BX10 602 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 C1QTNF3Q9BXJ4 246 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 PCBD2Q9H0N5 130 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 PTBP2Q9UKA9 531 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 TDRKHQ9Y2W6 561 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 CFAP20Q9Y6A4 193 aaKnown RBP14.1□□□□□ -0.15
SHMT2-210ENST00000553950 PCM1Q15154 2024 aa14.1□□□□□ -0.15
SHMT2-210ENST00000553950 LILRA5A6NI73 299 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 PATE3B3GLJ2 98 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MATN2O00339 956 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 GIPC1O14908 333 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 DLX3O60479 287 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 NPHS1O60500 1241 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MLYCDO95822 493 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 RPS17P08708 135 aaKnown RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 SBK3P0C264 359 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 IMPDH1P20839 514 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 KCNA4P22459 653 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 IMPA1P29218 277 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 PKLRP30613 574 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 GGT5P36269 586 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MDH1P40925 334 aaKnown RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 PNLIPRP1P54315 467 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 NAA25Q14CX7 972 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 DEFB133Q30KQ1 61 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 CAPN13Q6MZZ7 669 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 DUS1LQ6P1R4 473 aaKnown RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 OGFOD3Q6PK18 319 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 RGS9BPQ6ZS82 235 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 SYTL1Q8IYJ3 562 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 NAGSQ8N159 534 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MINDY1Q8N5J2 469 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 HMGCLL1Q8TB92 370 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MDM1Q8TC05 714 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 SAP25Q8TEE9 199 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 PPP4R1Q8TF05 950 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 DLG3Q92796 817 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 PHF21BQ96EK2 531 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MAGEB10Q96LZ2 347 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 CAMK1GQ96NX5 476 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 PKP4Q99569 1192 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 EPB41L1Q9H4G0 881 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 CCDC134Q9H6E4 229 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 EML4Q9HC35 981 aaKnown RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 MLXIPLQ9NP71 852 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 CCDC177Q9NQR7 707 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 DNAAF2Q9NVR5 837 aaKnown RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 OR6C2Q9NZP2 312 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 STOX2Q9P2F5 926 aaPredicted RBP14.09□□□□□ -0.15
SHMT2-210ENST00000553950 OPTCQ9UBM4 332 aa14.09□□□□□ -0.15
SHMT2-210ENST00000553950 LNP1A1A4G5 178 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 K7EPI3 171 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 DLL1O00548 723 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 FLRT2O43155 660 aa14.08□□□□□ -0.16
SHMT2-210ENST00000553950 STK16O75716 305 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms