RNA–Protein interactions for RNA: ENST00000553846.1

PRKCH-208, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-208ENST00000553846 UNC5AQ6ZN44 842 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 SHISA6Q6ZSJ9 500 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 CEP97Q8IW35 865 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 CFAP206Q8IYR0 622 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 AMER2Q8N7J2 671 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 CCNYQ8ND76 341 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 PHC3Q8NDX5 983 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 DNAJB8Q8NHS0 232 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 RAPGEF5Q92565 580 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.69□□□□□ -1.02
PRKCH-208ENST00000553846 OXNAD1Q96HP4 312 aaPredicted RBP8.69□□□□□ -1.02
PRKCH-208ENST00000553846 MRGPRX2Q96LB1 330 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 MAGEB10Q96LZ2 347 aaPredicted RBP8.69□□□□□ -1.02
PRKCH-208ENST00000553846 RNF157Q96PX1 679 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 HGH1Q9BTY7 390 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 MENTQ9BUN1 341 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 THAP2Q9H0W7 228 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 MVB12BQ9H7P6 319 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 SEMA3GQ9NS98 782 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 EURLQ9NYK6 297 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 PLA2G3Q9NZ20 509 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 UBP1Q9NZI7 540 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 FAM8A1Q9UBU6 413 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 IP6K2Q9UHH9 426 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 SH3BGRL2Q9UJC5 107 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 NXT1Q9UKK6 140 aaKnown RBP8.69□□□□□ -1.02
PRKCH-208ENST00000553846 NENFQ9UMX5 172 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 RPH3AQ9Y2J0 694 aaPredicted RBP8.69□□□□□ -1.02
PRKCH-208ENST00000553846 MEMO1Q9Y316 297 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 ZANQ9Y493 2812 aa8.69□□□□□ -1.02
PRKCH-208ENST00000553846 IGLV3-12A0A075B6K2 115 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 FITM1A5D6W6 292 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 DSCR3O14972 297 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 CHRM5P08912 532 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 MSH3P20585 1137 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 PTPN3P26045 913 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 ACADLP28330 430 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 AKT1P31749 480 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 EFNA3P52797 238 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 WNT3AP56704 352 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 PMP22Q01453 160 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 TFF3Q07654 80 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 WASHC5Q12768 1159 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 MSLNQ13421 630 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 SLC1A5Q15758 541 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 MICALCLQ6ZW33 695 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 TGIF2LYQ8IUE0 185 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 SIAH3Q8IW03 269 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 ANKRD20A12PQ8NF67 263 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 BRIX1Q8TDN6 353 aaKnown RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 THAP3Q8WTV1 239 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 PHF10Q8WUB8 498 aaKnown RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 RBM41Q96IZ5 413 aaKnown RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 TEKT5Q96M29 485 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 DMRTA2Q96SC8 542 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 GORASP1Q9BQQ3 440 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 SOX17Q9H6I2 414 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 ZNF160Q9HCG1 818 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 NPDC1Q9NQX5 325 aaPredicted RBP8.68□□□□□ -1.02
PRKCH-208ENST00000553846 TXLNGQ9NUQ3 528 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 HACD3Q9P035 362 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 PLCL2Q9UPR0 1127 aa8.68□□□□□ -1.02
PRKCH-208ENST00000553846 A0A0A6YYK5 440 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 MAP3K7O43318 606 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 SRP72O76094 671 aaKnown RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 USP1O94782 785 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 ZRANB2O95218 330 aaKnown RBP eCLIP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 RASAL1O95294 804 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 NADKO95544 446 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 WDPCPO95876 746 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 CRYABP02511 175 aaKnown RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 SERPINA7P05543 415 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 CELA2AP08217 269 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 ACPPP15309 386 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 FDXRP22570 491 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 MCM3P25205 808 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 DNAJA1P31689 397 aaKnown RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 SMSP52788 366 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 ARG2P78540 354 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 KLC1Q07866 573 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 PRKG2Q13237 762 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 GSE1Q14687 1217 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 RBBP7Q16576 425 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 TEX44Q53QW1 395 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 IRAK1BP1Q5VVH5 260 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 NPNTQ6UXI9 565 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 MEX3BQ6ZN04 569 aaKnown RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 RBM43Q6ZSC3 357 aaKnown RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 TTLL10Q6ZVT0 673 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 GLT6D1Q7Z4J2 308 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 FGD2Q7Z6J4 655 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 OR5AR1Q8NGP9 310 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 ZNF398Q8TD17 642 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 CHTF18Q8WVB6 975 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 DLG3Q92796 817 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 C8orf44Q96CB5 159 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 FERD3LQ96RJ6 166 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 FOXC2Q99958 501 aa8.67□□□□□ -1.02
PRKCH-208ENST00000553846 GSX1Q9H4S2 264 aaPredicted RBP8.67□□□□□ -1.02
PRKCH-208ENST00000553846 OR6C2Q9NZP2 312 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms