RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 DUSP12Q9UNI6 340 aa5.53□□□□□ -1.52
SCFD1-208ENST00000553278 DHX29Q7Z478 1369 aaKnown RBP5.53□□□□□ -1.52
SCFD1-208ENST00000553278 PTPRCP08575 1304 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 A0A087X1B8 175 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 HYKKA2RU49 373 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 C1QTNF3-AMACRE9PGA6 284 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 I6L893 689 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-208ENST00000553278 FOXN1O15353 648 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 BUD23O43709 281 aaKnown RBP5.52□□□□□ -1.53
SCFD1-208ENST00000553278 GPR137BO60478 399 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PRAF2O60831 178 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 BCAR3O75815 825 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 CH25HO95992 272 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 IFNB1P01574 187 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PRKCGP05129 697 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 FGF2P09038 288 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 AREGP15514 252 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PIK3R1P27986 724 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PTGER4P35408 488 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PRPHP41219 470 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PSMC4P43686 418 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 MMP15P51511 669 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 GSDMDP57764 484 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 COG7P83436 770 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PDE1BQ01064 536 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 GALK2Q01415 458 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 AKAP17AQ02040 695 aaKnown RBP5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PNRC1Q12796 327 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-208ENST00000553278 VEZF1Q14119 521 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 NPTX1Q15818 432 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PTGISQ16647 500 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 SPATS1Q496A3 300 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 RAB6CQ53S08 254 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 SYT14P1Q58G82 188 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 CEP78Q5JTW2 689 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 TEX35Q5T0J7 233 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 C11orf63Q6NUN7 778 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 KLC3Q6P597 504 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PSRC1Q6PGN9 363 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-208ENST00000553278 OLFML1Q6UWY5 402 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 Q6ZPA2 131 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 DGLUCYQ7Z3D6 616 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 ARHGAP22Q7Z5H3 698 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 ANKRD46Q86W74 232 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 AMIGO1Q86WK6 493 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 KIAA0895Q8NCT3 520 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 CCNYQ8ND76 341 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 C7orf57Q8NEG2 295 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 OR5R1Q8NH85 324 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 OR14A16Q8NHC5 309 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 INPP5DQ92835 1189 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 SEMA4DQ92854 862 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 NSMCE2Q96MF7 247 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 PRRG4Q9BZD6 226 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 RAB6CQ9H0N0 254 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 NAPBQ9H115 298 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 TSPAN16Q9UKR8 245 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 EXOC6BQ9Y2D4 811 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.52□□□□□ -1.53
SCFD1-208ENST00000553278 IKBKGQ9Y6K9 419 aa5.52□□□□□ -1.53
SCFD1-208ENST00000553278 IGHV4-28A0A0C4DH34 117 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 C2orf92A0A1B0GVN3 265 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 SMIM35A0A1B0GVV1 85 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 hDV102S1A0JD36 115 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 MED19A0JLT2 244 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-208ENST00000553278 ARHGAP42A6NI28 874 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 PEX11AO75192 247 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 RPS6KA5O75582 802 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 C1QL1O75973 258 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 SOX30O94993 753 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 BMP10O95393 424 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 LATS1O95835 1130 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 GSRP00390 522 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 CYP2A7P20853 494 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 ARHGAP25P42331 645 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 NUDT6P53370 316 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 KCNJ10P78508 379 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 MAT1AQ00266 395 aaKnown RBP5.51□□□□□ -1.53
SCFD1-208ENST00000553278 ILF2Q12905 390 aaKnown RBP5.51□□□□□ -1.53
SCFD1-208ENST00000553278 TSTA3Q13630 321 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-208ENST00000553278 MCMDC2Q4G0Z9 681 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 FSCBQ5H9T9 825 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 PAPPA-AS1Q5QFB9 102 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 GRTP1Q5TC63 336 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 IGFL4Q6B9Z1 124 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 ZCCHC12Q6PEW1 402 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 Q75L30 129 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 TBC1D21Q8IYX1 336 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 CLEC1AQ8NC01 280 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 IPMKQ8NFU5 416 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 OR52E1Q8NGJ3 308 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 OR52I2Q8NH67 350 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 CCDC107Q8WV48 283 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 DAZLQ92904 295 aaKnown RBP5.51□□□□□ -1.53
SCFD1-208ENST00000553278 DHX58Q96C10 678 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 TXNDC15Q96J42 360 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 FAM84BQ96KN1 310 aaPredicted RBP5.51□□□□□ -1.53
SCFD1-208ENST00000553278 CTAGE1Q96RT6 745 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 IWS1Q96ST2 819 aa5.51□□□□□ -1.53
SCFD1-208ENST00000553278 TRMOQ9BU70 441 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms