RNA–Protein interactions for RNA: ENST00000552875.2

PRKCH-203, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-203ENST00000552875 ARHGAP12Q8IWW6 846 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 PYROXD2Q8N2H3 581 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 VWA5B2Q8N398 1253 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 EMC1Q8N766 993 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 OR5M3Q8NGP4 307 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 FAM172AQ8WUF8 416 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 LCN9Q8WX39 176 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 GLYATL1Q969I3 302 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 PIP5K1AQ99755 562 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 MGME1Q9BQP7 344 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 MAGEB5Q9BZ81 275 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 PLA2G12AQ9BZM1 189 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 KLHL25Q9H0H3 589 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 KLHL1Q9NR64 748 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 GNPTGQ9UJJ9 305 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 MYO6Q9UM54 1294 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.34□□□□□ -1.07
PRKCH-203ENST00000552875 ANK2Q01484 3957 aa8.34□□□□□ -1.07
PRKCH-203ENST00000552875 GOLGA6L6A8MZA4 724 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 DDX3XO00571 662 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 DAPK3O43293 454 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 PRMT3O60678 531 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 GYPCP04921 128 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CYP11B1P15538 503 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 DESP17661 470 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 PON1P27169 355 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 UQCRC1P31930 480 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 PTPN9P43378 593 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 HCFC1P51610 2035 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 BPIFB4P59827 614 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CHD3Q12873 2000 aaKnown RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CCDC14Q49A88 953 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 PPP1R15BQ5SWA1 713 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 SCYL2Q6P3W7 929 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 TTLL10Q6ZVT0 673 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CXorf67Q86X51 503 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CREBRFQ8IUR6 639 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 MCATQ8IVS2 390 aaKnown RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 TRAM1L1Q8N609 369 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 C19orf47Q8N9M1 422 aaKnown RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 BRSK1Q8TDC3 778 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 RXFP2Q8WXD0 754 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 C12orf66Q96MD2 445 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 NSMCE3Q96MG7 304 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 WDR24Q96S15 920 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 UTP23Q9BRU9 249 aaKnown RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 ZCCHC2Q9C0B9 1178 aaKnown RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CHRNA10Q9GZZ6 450 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 GANQ9H2C0 597 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 DEF6Q9H4E7 631 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 LRTM1Q9HBL6 345 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 SIX2Q9NPC8 291 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 METTL5Q9NRN9 209 aaKnown RBP8.33□□□□□ -1.08
PRKCH-203ENST00000552875 HAUS2Q9NVX0 235 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 ADGRE2Q9UHX3 823 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 CAPN11Q9UMQ6 739 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 HEBP2Q9Y5Z4 205 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 GTF3C1Q12789 2109 aa8.33□□□□□ -1.08
PRKCH-203ENST00000552875 A0A1B0GTH9 108 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 H3BMH7 237 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 PES1O00541 588 aaKnown RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 ZNHIT1O43257 154 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 TLX2O43763 284 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 DNAJB6O75190 326 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 CNOT4O95628 575 aaKnown RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 ONECUT2O95948 504 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 PDHA1P08559 390 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 SLC35G4P0C7Q5 338 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 FAM157CP0CG43 387 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 COX6A1P12074 109 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 NUP107P57740 925 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 RPL26P61254 145 aaKnown RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 DEFB110Q30KQ9 67 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 YOD1Q5VVQ6 348 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 ARHGAP11AQ6P4F7 1023 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 CNGA4Q8IV77 575 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 TMEM151BQ8IW70 566 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 CHERPQ8IWX8 916 aaKnown RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 ACVR1CQ8NER5 493 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 NEK11Q8NG66 645 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 GDAP1Q8TB36 358 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 CENPIQ92674 756 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 MIEF2Q96C03 454 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 SCMH1Q96GD3 660 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 ZNF354BQ96LW1 612 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 LYSMD1Q96S90 227 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 YIPF4Q9BSR8 244 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 NUP85Q9BW27 656 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 SLC22A11Q9NSA0 550 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 B4GALT7Q9UBV7 327 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 C3orf18Q9UK00 162 aa8.32□□□□□ -1.08
PRKCH-203ENST00000552875 RPL26L1Q9UNX3 145 aaKnown RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 CFAP20Q9Y6A4 193 aaKnown RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 DNMT3AQ9Y6K1 912 aaPredicted RBP8.32□□□□□ -1.08
PRKCH-203ENST00000552875 KLHL33A6NCF5 533 aa8.31□□□□□ -1.08
PRKCH-203ENST00000552875 TUBAL3A6NHL2 446 aa8.31□□□□□ -1.08
PRKCH-203ENST00000552875 EIF3CLB5ME19 914 aaKnown RBP8.31□□□□□ -1.08
PRKCH-203ENST00000552875 SYT5O00445 386 aa8.31□□□□□ -1.08
PRKCH-203ENST00000552875 TFECO14948 347 aaPredicted RBP8.31□□□□□ -1.08
PRKCH-203ENST00000552875 FZD6O60353 706 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms