RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ST6GAL1P15907 406 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 POU3F2P20265 443 aaPredicted RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 CYP2A7P20853 494 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 AGXTP21549 392 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 CTNNA2P26232 953 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 ELAVL4P26378 380 aaKnown RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 ACRV1P26436 265 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 MC4RP32245 332 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 EIF3EP60228 445 aaKnown RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 OLIG2Q13516 323 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 BOP1Q14137 746 aaKnown RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 SKOR2Q2VWA4 1001 aaPredicted RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 NADK2Q4G0N4 442 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 PRAMEF17Q5VTA0 474 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 DENND5AQ6IQ26 1287 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 LCN10Q6JVE6 187 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 JMJD6Q6NYC1 403 aaPredicted RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 ZNF449Q6P9G9 518 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 FBXO38Q6PIJ6 1188 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 AMIGO1Q86WK6 493 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 RAB43Q86YS6 212 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 TICAM1Q8IUC6 712 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 TC2NQ8N9U0 490 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 GLIS1Q8NBF1 620 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 FDCSPQ8NFU4 85 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 OR52E1Q8NGJ3 308 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 OR13C4Q8NGS5 318 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 NAT14Q8WUY8 206 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 SPATA13Q96N96 652 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 TRAPPC9Q96Q05 1148 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 SMAD5Q99717 465 aaKnown RBP7.38□□□□□ -1.23
NEK3-201ENST00000550331 TBL1YQ9BQ87 522 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 C17orf62Q9BQA9 187 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 APOL2Q9BQE5 337 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 OSBPL8Q9BZF1 889 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 SLC7A5P2Q9GIP4 190 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 CHRNA10Q9GZZ6 450 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 TSPY26PQ9H489 355 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 C10orf88Q9H8K7 445 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 CASS4Q9NQ75 786 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 ACTR10Q9NZ32 417 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 PCDHA3Q9Y5H8 950 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 F8P00451 2351 aa7.38□□□□□ -1.23
NEK3-201ENST00000550331 MACROD2A1Z1Q3 448 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 QSOX1O00391 747 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 LIN7AO14910 233 aaPredicted RBP7.37□□□□□ -1.23
NEK3-201ENST00000550331 ZNF749O43361 778 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 TJP3O95049 919 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 CD63P08962 238 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 SHMT2P34897 504 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 CYLC1P35663 651 aaPredicted RBP7.37□□□□□ -1.23
NEK3-201ENST00000550331 CETN2P41208 172 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 LMAN1P49257 510 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 ITGA1P56199 1179 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 RWDD2BP57060 319 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 TMPRSS15P98073 1019 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 CACNG1Q06432 222 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 POU4F2Q12837 409 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 ITIH4Q14624 930 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 KCTD11Q693B1 232 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 SLC6A19Q695T7 634 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 DARS2Q6PI48 645 aaKnown RBP7.37□□□□□ -1.23
NEK3-201ENST00000550331 SPESP1Q6UW49 350 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 CDHR3Q6ZTQ4 885 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 GPR135Q8IZ08 494 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 ADGRF3Q8IZF5 1079 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 ZBTB2Q8N680 514 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 CCDC110Q8TBZ0 833 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 PROKR1Q8TCW9 393 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 TFGQ92734 400 aaPredicted RBP7.37□□□□□ -1.23
NEK3-201ENST00000550331 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.37□□□□□ -1.23
NEK3-201ENST00000550331 PNPLA2Q96AD5 504 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 DNAJC1Q96KC8 554 aaKnown RBP7.37□□□□□ -1.23
NEK3-201ENST00000550331 IP6K3Q96PC2 410 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 HGH1Q9BTY7 390 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 NUDT9Q9BW91 350 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 SLC29A3Q9BZD2 475 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 FAM96AQ9H5X1 160 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 SLAMF7Q9NQ25 335 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 NLE1Q9NVX2 485 aaPredicted RBP7.37□□□□□ -1.23
NEK3-201ENST00000550331 GPR83Q9NYM4 423 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 C5AR2Q9P296 337 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 TFR2Q9UP52 801 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 AP1M2Q9Y6Q5 423 aa7.37□□□□□ -1.23
NEK3-201ENST00000550331 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 BTNL10A8MVZ5 291 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 TCP11X1B4DZS4 312 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 H3BMH7 237 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 CCL22O00626 93 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 ZNF185O15231 689 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 DDX3YO15523 660 aaKnown RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 KLHL41O60662 606 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 KLF7O75840 302 aaPredicted RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 OR2B3O76000 313 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 IPO7O95373 1038 aaKnown RBP7.36□□□□□ -1.23
NEK3-201ENST00000550331 CLDN1O95832 211 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 IGHEP01854 428 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 FTH1P02794 183 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 ALPPP05187 535 aa7.36□□□□□ -1.23
NEK3-201ENST00000550331 BMP4P12644 408 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms