RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 KCTD11Q693B1 232 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 MRPL14Q6P1L8 145 aaKnown RBP14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CUZD1Q86UP6 607 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 FAM20CQ8IXL6 584 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 DNAJC22Q8N4W6 341 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CDKN2AIPNLQ96HQ2 116 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 C5orf34Q96MH7 638 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 AP1M1Q9BXS5 423 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CHRNA10Q9GZZ6 450 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 IRAK4Q9NWZ3 460 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 SLC5A6Q9Y289 635 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 EFR3BQ9Y2G0 817 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 PCDHA3Q9Y5H8 950 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 COPG1Q9Y678 874 aaKnown RBP14.85□□□□□ -0.03
RAB5C-205ENST00000550013 SVILO95425 2214 aa14.85□□□□□ -0.03
RAB5C-205ENST00000550013 CROCCQ5TZA2 2017 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 OR51F1A6NGY5 319 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 BHMG1C9JSJ3 638 aaPredicted RBP14.84□□□□□ -0.03
RAB5C-205ENST00000550013 ALOX12BO75342 701 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 IGHEP01854 428 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 GSTM1P09488 218 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 PTPN7P35236 360 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 GLRBP48167 497 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 GSTM4Q03013 218 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 CYP2A13Q16696 494 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 TBC1D21Q8IYX1 336 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 ZADH2Q8N4Q0 377 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 TC2NQ8N9U0 490 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 ELMO1Q92556 727 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 PTERQ96BW5 349 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 PPP1R2P1Q96PQ5 205 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 SLC22A11Q9NSA0 550 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 TXLNGQ9NUQ3 528 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 OR6C2Q9NZP2 312 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 SRPK3Q9UPE1 567 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 KLHL20Q9Y2M5 609 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 PCDHGA10Q9Y5H3 936 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 CSAG2Q9Y5P2 127 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 ZGRF1Q86YA3 2104 aa14.84□□□□□ -0.03
RAB5C-205ENST00000550013 RCCD1A6NED2 376 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 ISM1B1AKI9 464 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 METTL18O95568 372 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 ITGAXP20702 1163 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 SOX8P57073 446 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 SYTL3Q4VX76 610 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 TLDC1Q6P9B6 456 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 Q6ZS92 163 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 LMNTD1Q8N9Z9 388 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 OR5K2Q8NHB8 316 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 STYXQ8WUJ0 223 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 TM9SF4Q92544 642 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 LRRC45Q96CN5 670 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 BARD1Q99728 777 aaKnown RBP14.83□□□□□ -0.04
RAB5C-205ENST00000550013 NDC1Q9BTX1 674 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 ATP13A2Q9NQ11 1180 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 IMPACTQ9P2X3 320 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 POLG2Q9UHN1 485 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 FBXL4Q9UKA2 621 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 PLCL2Q9UPR0 1127 aa14.83□□□□□ -0.04
RAB5C-205ENST00000550013 SLC5A10A0PJK1 596 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 AGPSO00116 658 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 KLHL41O60662 606 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 IPO13O94829 963 aaKnown RBP14.82□□□□□ -0.04
RAB5C-205ENST00000550013 AP2A1O95782 977 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 FTH1P02794 183 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 CD63P08962 238 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 MAGP20916 626 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 ITGA3P26006 1051 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 MSNP26038 577 aaKnown RBP14.82□□□□□ -0.04
RAB5C-205ENST00000550013 NSG1P42857 185 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 CSE1LP55060 971 aaKnown RBP14.82□□□□□ -0.04
RAB5C-205ENST00000550013 ELOAQ14241 798 aaKnown RBP14.82□□□□□ -0.04
RAB5C-205ENST00000550013 ITIH4Q14624 930 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 HIF1AQ16665 826 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 SLC5A12Q1EHB4 618 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 PARP6Q2NL67 630 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 PACS1Q6VY07 963 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 ARHGEF18Q6ZSZ5 1173 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 TMTC1Q8IUR5 882 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 TAB3Q8N5C8 712 aaPredicted RBP14.82□□□□□ -0.04
RAB5C-205ENST00000550013 FAM71DQ8N9W8 422 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 RNF214Q8ND24 703 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 UBE2Q2Q8WVN8 375 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 ALG3Q92685 438 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 SLC6A20Q9NP91 592 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 EURLQ9NYK6 297 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 CIDEBQ9UHD4 219 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 DUSP10Q9Y6W6 482 aa14.82□□□□□ -0.04
RAB5C-205ENST00000550013 CCDC162PA2VCL2 907 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 OR1I1O60431 355 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 TJP3O95049 919 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 ALAS2P22557 587 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 PSMA3P25788 255 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 PKLRP30613 574 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 FOXN2P32314 431 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 GCGRP47871 477 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 RWDD2BP57060 319 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 AIMP2Q13155 320 aaKnown RBP14.81□□□□□ -0.04
RAB5C-205ENST00000550013 KIR2DS3Q14952 304 aa14.81□□□□□ -0.04
RAB5C-205ENST00000550013 SPA17Q15506 151 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms