RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 ANGPT4Q9Y264 503 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 COL24A1Q17RW2 1714 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 ARID1BQ8NFD5 2236 aaPredicted RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 CACNB4O00305 520 aaPredicted RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 SLC22A2O15244 555 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 ADH5P11766 374 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 NOS3P29474 1203 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 TIE1P35590 1138 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 CHSY3Q70JA7 882 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 RGL4Q8IZJ4 473 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 ADGRG2Q8IZP9 1017 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 OR7A2PQ8NGA2 310 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 AIF1LQ9BQI0 150 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 SAMD4AQ9UPU9 718 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 POP7O75817 140 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 SLC26A3P40879 764 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 C21orf59P57076 290 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 MS4A2Q01362 244 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 ROR2Q01974 943 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 ATAT1Q5SQI0 421 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 EIF3MQ7L2H7 374 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 R3HCC1LQ7Z5L2 792 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 OR8H2Q8N162 312 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 NT5C3BQ969T7 300 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 C11orf84Q9BUA3 381 aaPredicted RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 DUSP26Q9BV47 211 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 PALMDQ9NP74 551 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 IL36AQ9UHA7 158 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 PSME2Q9UL46 239 aa14.67□□□□□ -0.06
CUX1-214ENST00000550008 POLR2AP24928 1970 aaKnown RBP14.67□□□□□ -0.06
CUX1-214ENST00000550008 FADS2O95864 444 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 PRPS2P11908 318 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 FDXRP22570 491 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 VIPR2P41587 438 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 DCTN2Q13561 401 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 ANXA8L1Q5VT79 327 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 C16orf62Q7Z3J2 963 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 VN1R5Q7Z5H4 357 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.66□□□□□ -0.06
CUX1-214ENST00000550008 PHC3Q8NDX5 983 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 MDGA1Q8NFP4 955 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 ARRDC2Q8TBH0 407 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 MZB1Q8WU39 189 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 USP7Q93009 1102 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 C12orf66Q96MD2 445 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 FAM210AQ96ND0 272 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 CLSTN3Q9BQT9 956 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 EPB41L1Q9H4G0 881 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 VPS29Q9UBQ0 182 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 SUCOQ9UBS9 1254 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 FBXW2Q9UKT8 454 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 COMMD3-BMI1R4GMX3 469 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 ADARP55265 1226 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 EPS8Q12929 822 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 GRM2Q14416 872 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 OTUD1Q5VV17 481 aaPredicted RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 FAM129CQ86XR2 697 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 CCDC103Q8IW40 242 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 HDDC3Q8N4P3 179 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 RAD51AP1Q96B01 352 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 TLR9Q9NR96 1032 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 ASCC3Q8N3C0 2202 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 PRORSD1PA6NEY8 169 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 PLK4O00444 970 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 MANBAO00462 879 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 DFNA5O60443 496 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 AMD1P17707 334 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 CTSOP43234 321 aaPredicted RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 XKR4Q5GH76 650 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 AGTRAPQ6RW13 159 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 SLC39A5Q6ZMH5 540 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 AMZ2Q86W34 360 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 TRIM69Q86WT6 500 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 SVOPQ8N4V2 548 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 CRISPLD1Q9H336 500 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 EURLQ9NYK6 297 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 MYO10Q9HD67 2058 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 TTC34A8MYJ7 566 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 PITPNM1O00562 1244 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 PCDH7O60245 1069 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 KRT75O95678 551 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 BPIP17213 487 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 HTR1BP28222 390 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 PSMD7P51665 324 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 CDH12P55289 794 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 MRPS15P82914 257 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 MADCAM1Q13477 382 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 USP39Q53GS9 565 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 NADSYN1Q6IA69 706 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 C11orf65Q8NCR3 313 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 FAM81AQ8TBF8 368 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 FAM110BQ8TC76 370 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 GTPBP3Q969Y2 492 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 FUBP1Q96AE4 644 aaKnown RBP14.66□□□□□ -0.06
CUX1-214ENST00000550008 FAIM2Q9BWQ8 316 aa14.66□□□□□ -0.06
CUX1-214ENST00000550008 CLIC1O00299 241 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 BCKDKO14874 412 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 ZW10O43264 779 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 TSPAN6O43657 245 aa14.65□□□□□ -0.06
CUX1-214ENST00000550008 RASGRP1O95267 797 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms