RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 SLC6A2P23975 617 aa20.39■□□□□ 0.86
RITA1-201ENST00000548278 PBLDP30039 288 aaPredicted RBP20.39■□□□□ 0.86
RITA1-201ENST00000548278 GNPDA1P46926 289 aa20.39■□□□□ 0.86
RITA1-201ENST00000548278 YBX1P67809 324 aaKnown RBP20.39■□□□□ 0.86
RITA1-201ENST00000548278 CAPRIN1Q14444 709 aaKnown RBP20.39■□□□□ 0.86
RITA1-201ENST00000548278 C6orf10Q5SRN2 563 aa20.39■□□□□ 0.86
RITA1-201ENST00000548278 FAM46CQ5VWP2 391 aa20.39■□□□□ 0.86
RITA1-201ENST00000548278 CES5AQ6NT32 575 aa20.39■□□□□ 0.86
RITA1-201ENST00000548278 SLC15A3Q8IY34 581 aa20.39■□□□□ 0.86
RITA1-201ENST00000548278 LEF1Q9UJU2 399 aaPredicted RBP20.39■□□□□ 0.86
RITA1-201ENST00000548278 JAK1P23458 1154 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 DRD3P35462 400 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 CCSMST1Q4G0I0 132 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 TIGD2Q4W5G0 525 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 SLC44A4Q53GD3 710 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 CCDC138Q96M89 665 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 ZNF184Q99676 751 aaPredicted RBP20.39■□□□□ 0.85
RITA1-201ENST00000548278 TRMT61BQ9BVS5 477 aaKnown RBP20.39■□□□□ 0.85
RITA1-201ENST00000548278 LRTM1Q9HBL6 345 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 CMTM6Q9NX76 183 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 GMPR2Q9P2T1 348 aaKnown RBP20.39■□□□□ 0.85
RITA1-201ENST00000548278 ATXN10Q9UBB4 475 aa20.39■□□□□ 0.85
RITA1-201ENST00000548278 CKAP5Q14008 2032 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 DYTNA2CJ06 578 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 NPC1O15118 1278 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 PDYNP01213 254 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 CATP04040 527 aaKnown RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 WASP42768 502 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 MAPK9P45984 424 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 MAD2L1Q13257 205 aaPredicted RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 NFYCQ13952 458 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 IMPG1Q17R60 797 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 HABP4Q5JVS0 413 aaKnown RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 XKR5Q6UX68 686 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 PQLC1Q8N2U9 271 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 MTFMTQ96DP5 389 aaKnown RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 ACPTQ9BZG2 426 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 ASIC5Q9NY37 505 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 EPS15L1Q9UBC2 864 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 EIF3LQ9Y262 564 aaKnown RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 CASQ2O14958 399 aaPredicted RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 RSL1D1O76021 490 aaKnown RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 BDKRB1P46663 353 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 SOX9P48436 509 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 DLX2Q07687 328 aaPredicted RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 SPATA24Q86W54 205 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 TRAPPC5Q8IUR0 188 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 ZNF547Q8IVP9 402 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 AADATQ8N5Z0 425 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 RSPH9Q9H1X1 276 aaPredicted RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 C6orf203Q9P0P8 240 aaPredicted RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 STOX2Q9P2F5 926 aaPredicted RBP20.38■□□□□ 0.85
RITA1-201ENST00000548278 SNX6Q9UNH7 406 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 PCDHA9Q9Y5H5 950 aa20.38■□□□□ 0.85
RITA1-201ENST00000548278 H3BM21 787 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 LIN7AO14910 233 aaPredicted RBP20.37■□□□□ 0.85
RITA1-201ENST00000548278 C8BP07358 591 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 NUDT18Q6ZVK8 323 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 KLHDC8AQ8IYD2 350 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 CFAP206Q8IYR0 622 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 CHPFQ8IZ52 775 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 SELENOMQ8WWX9 145 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 ATL1Q8WXF7 558 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 ZNF514Q96K75 400 aaPredicted RBP20.37■□□□□ 0.85
RITA1-201ENST00000548278 LINC00615Q96LM1 132 aaPredicted RBP20.37■□□□□ 0.85
RITA1-201ENST00000548278 PKP4Q99569 1192 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 INTS7Q9NVH2 962 aaKnown RBP20.37■□□□□ 0.85
RITA1-201ENST00000548278 C1orf109Q9NX04 203 aa20.37■□□□□ 0.85
RITA1-201ENST00000548278 GRXCR2A6NFK2 248 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 MID1O15344 667 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 DNAJA2O60884 412 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 SEC22BO75396 215 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 HSD17B1P14061 328 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 ZNF8P17098 575 aaPredicted RBP20.36■□□□□ 0.85
RITA1-201ENST00000548278 GTF2A1P52655 376 aaPredicted RBP20.36■□□□□ 0.85
RITA1-201ENST00000548278 TAS2R38P59533 333 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 CAMK2GQ13555 558 aaPredicted RBP20.36■□□□□ 0.85
RITA1-201ENST00000548278 KIAA0040Q15053 153 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 AAK1Q2M2I8 961 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 MAP7D1Q3KQU3 841 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 AGBL4Q5VU57 503 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 LPCAT4Q643R3 524 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 AGTRAPQ6RW13 159 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 IZUMO2Q6UXV1 221 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 THOC6Q86W42 341 aaKnown RBP20.36■□□□□ 0.85
RITA1-201ENST00000548278 DPP10Q8N608 796 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 PLA2G15Q8NCC3 412 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 NUDT8Q8WV74 236 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 TMEM125Q96AQ2 219 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 FOPNLQ96NB1 174 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 ELOVL6Q9H5J4 265 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 SLAMF8Q9P0V8 285 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 PRSS51A0A1B0GVH4 220 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 VEGFDO43915 354 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 VARSP26640 1264 aaKnown RBP20.36■□□□□ 0.85
RITA1-201ENST00000548278 PEX2P28328 305 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 NEK2P51955 445 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 CHIT1Q13231 466 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 GTF2H3Q13889 308 aa20.36■□□□□ 0.85
RITA1-201ENST00000548278 PTGR1Q14914 329 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms