RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 STAG3L4Q8TBR4 150 aa16.96■□□□□ 0.31
HDAC7-227ENST00000548080 BCAS4Q8TDM0 211 aa16.96■□□□□ 0.31
HDAC7-227ENST00000548080 TIMM29Q9BSF4 260 aa16.96■□□□□ 0.31
HDAC7-227ENST00000548080 PSMD13Q9UNM6 376 aa16.96■□□□□ 0.31
HDAC7-227ENST00000548080 RNF215Q9Y6U7 377 aa16.96■□□□□ 0.31
HDAC7-227ENST00000548080 PTPRBP23467 1997 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 EME2A4GXA9 379 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-227ENST00000548080 H2AFYO75367 372 aaKnown RBP16.95■□□□□ 0.3
HDAC7-227ENST00000548080 GRK2P25098 689 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 KCNC1P48547 511 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 RPIAP49247 311 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 DUSP3P51452 185 aaPredicted RBP16.95■□□□□ 0.3
HDAC7-227ENST00000548080 BST1Q10588 318 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 ASPHQ12797 758 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 OR4D1Q15615 310 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 ACSBG2Q5FVE4 666 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 PLEKHS1Q5SXH7 462 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 NAPRTQ6XQN6 538 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 AMZ2Q86W34 360 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 MYO1HQ8N1T3 1032 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 SLC37A2Q8TED4 501 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 CCDC126Q96EE4 140 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 PITPNM3Q9BZ71 974 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 SLCO1B3Q9NPD5 702 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 IKZF3Q9UKT9 509 aa16.95■□□□□ 0.3
HDAC7-227ENST00000548080 PRAMEF33A0A0G2JMD5 474 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 FAM149AA5PLN7 773 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 EIF3FO00303 357 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-227ENST00000548080 CDC7O00311 574 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 BTN3A1O00481 513 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 NDUFAB1O14561 156 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 EDF1O60869 148 aaKnown RBP16.94■□□□□ 0.3
HDAC7-227ENST00000548080 PRLHRP49683 370 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 TSNQ15631 228 aaKnown RBP16.94■□□□□ 0.3
HDAC7-227ENST00000548080 BCL7AQ4VC05 210 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 LIPMQ5VYY2 423 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 CES4AQ5XG92 561 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 XKR5Q6UX68 686 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 ZCCHC23Q6ZST2 131 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 ARL14Q8N4G2 192 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 OR6Y1Q8NGX8 325 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 ZNF473Q8WTR7 871 aaKnown RBP16.94■□□□□ 0.3
HDAC7-227ENST00000548080 ZNF514Q96K75 400 aaPredicted RBP16.94■□□□□ 0.3
HDAC7-227ENST00000548080 ATOH8Q96SQ7 321 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 CCDC3Q9BQI4 270 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 LRIT1Q9P2V4 623 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 RNF112Q9ULX5 631 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 WDR37Q9Y2I8 494 aa16.94■□□□□ 0.3
HDAC7-227ENST00000548080 A6NCN8 305 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 NPEPPSL1A6NEC2 478 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 PRR19A6NJB7 356 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 KERAO60938 352 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 SMIM24O75264 130 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 DKK1O94907 266 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 ADRB1P08588 477 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 TPBGLP0DKB5 382 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 ENO3P13929 434 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 DNAJB13P59910 316 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 GBX1Q14549 363 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 PIWIL4Q7Z3Z4 852 aaKnown RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 SLC22A9Q8IVM8 553 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 MAPK15Q8TD08 544 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 ELMO1Q92556 727 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 GRAMD1AQ96CP6 724 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 CCM2Q9BSQ5 444 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 GATA5Q9BWX5 397 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 THAP1Q9NVV9 213 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 NCKIPSDQ9NZQ3 722 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 OR52A4PA6NMU1 304 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 SYCE1LA8MT33 242 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 PPM1DO15297 605 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 SNNO75324 88 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 F3P13726 295 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 IDSP22304 550 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 BIRC2Q13490 618 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 IYDQ6PHW0 289 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 CYHR1Q6ZMK1 362 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 ERMP1Q7Z2K6 904 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 RAB44Q7Z6P3 723 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 C17orf82Q86X59 251 aaPredicted RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 ADAMTS14Q8WXS8 1223 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 EVA1BQ9NVM1 165 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 KLK13Q9UKR3 277 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 PCDHGA1Q9Y5H4 931 aa16.93■□□□□ 0.3
HDAC7-227ENST00000548080 CFAP20Q9Y6A4 193 aaKnown RBP16.93■□□□□ 0.3
HDAC7-227ENST00000548080 MGAT4DA6NG13 374 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 RHPN2P1A8MT19 583 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 A8MT66 165 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 TMEM114B3SHH9 223 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 IPO13O94829 963 aaKnown RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 GSTM1P09488 218 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 MPC1LP0DKB6 136 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 VCLP18206 1134 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 PREPP48147 710 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 SLC1A6P48664 564 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 CLCNKAP51800 687 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 OR1D5P58170 312 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 CCL7P80098 99 aa16.92■□□□□ 0.3
HDAC7-227ENST00000548080 INSM1Q01101 510 aaPredicted RBP16.92■□□□□ 0.3
HDAC7-227ENST00000548080 OCRLQ01968 901 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms