RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 CASQ1P31415 396 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 ETF1P62495 437 aaKnown RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 CTBP1Q13363 440 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 GRB7Q14451 532 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 GPR19Q15760 415 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 TTLL9Q3SXZ7 439 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 TAF1BQ53T94 588 aaPredicted RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 ZNF789Q5FWF6 425 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 KIAA1614Q5VZ46 1190 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 PWWP2BQ6NUJ5 590 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 HIBCHQ6NVY1 386 aaPredicted RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 RAB42Q8N4Z0 105 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 ZBTB2Q8N680 514 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 GALNT6Q8NCL4 622 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 MAGEC3Q8TD91 643 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 SKA2Q8WVK7 121 aaPredicted RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 KCNJ9Q92806 393 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 SLC22A18Q96BI1 424 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 LRRC39Q96DD0 335 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 OR2A14Q96R47 310 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 TRIM51Q9BSJ1 452 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 MENTQ9BUN1 341 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 SLC12A9Q9BXP2 914 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 CHRNA10Q9GZZ6 450 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 FBXO6Q9NRD1 293 aaPredicted RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 KLHL42Q9P2K6 505 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 PLAGL1Q9UM63 463 aa15.37■□□□□ 0.05
DDX54-204ENST00000546898 SMG1Q96Q15 3661 aaKnown RBP15.37■□□□□ 0.05
DDX54-204ENST00000546898 PCM1Q15154 2024 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 EIF4E1BA6NMX2 242 aaKnown RBP15.36■□□□□ 0.05
DDX54-204ENST00000546898 ISM1B1AKI9 464 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 RASGRF2O14827 1237 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 CPNE3O75131 537 aaKnown RBP15.36■□□□□ 0.05
DDX54-204ENST00000546898 SCRG1O75711 98 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 SEC31AO94979 1220 aaKnown RBP15.36■□□□□ 0.05
DDX54-204ENST00000546898 TIAF1O95411 115 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 C1orf105O95561 183 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 CCNYL3P0C7X3 344 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 CD9P21926 228 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 MC1RQ01726 317 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 BBS9Q3SYG4 887 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 MSS51Q4VC12 460 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 HSP90AA5PQ58FG0 334 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 PCSK4Q6UW60 755 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 TMEM126BQ8IUX1 230 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 C19orf47Q8N9M1 422 aaKnown RBP15.36■□□□□ 0.05
DDX54-204ENST00000546898 OR2L8Q8NGY9 312 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 FLVCR1-AS1Q8TAF5 88 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 SLC39A7Q92504 469 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 KRT12Q99456 494 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 SPHK1Q9NYA1 384 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 FBXO5Q9UKT4 447 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 SLC39A10Q9ULF5 831 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 PCDHB3Q9Y5E6 796 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 NFS1Q9Y697 457 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 LOC400499M0QZD8 3231 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 COL6A6A6NMZ7 2263 aa15.36■□□□□ 0.05
DDX54-204ENST00000546898 EFCAB8A8MWE9 144 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 FKBP9O95302 570 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 MATN4O95460 622 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 PVRP15151 417 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 PEBP1P30086 187 aaKnown RBP15.35■□□□□ 0.05
DDX54-204ENST00000546898 CLCN7P51798 805 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 ITGA8P53708 1063 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 ARL4CP56559 192 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 HIF1AQ16665 826 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 CRTC2Q53ET0 693 aaPredicted RBP15.35■□□□□ 0.05
DDX54-204ENST00000546898 CNSTQ6PJW8 725 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 KIAA0408Q6ZU52 694 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 NEK10Q6ZWH5 1172 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 CNTN4Q8IWV2 1026 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 C17orf53Q8N3J3 647 aaPredicted RBP15.35■□□□□ 0.05
DDX54-204ENST00000546898 LINC01555Q8NAE3 123 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 C2CD4AQ8NCU7 369 aaPredicted RBP15.35■□□□□ 0.05
DDX54-204ENST00000546898 BBOF1Q8ND07 529 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 CERS2Q96G23 380 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 TCTN2Q96GX1 697 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 LRFN5Q96NI6 719 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 LHX9Q9NQ69 397 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 IARS2Q9NSE4 1012 aaKnown RBP15.35■□□□□ 0.05
DDX54-204ENST00000546898 SPATA7Q9P0W8 599 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 KCND3Q9UK17 655 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 PADI1Q9ULC6 663 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 SEC16AO15027 2179 aa15.35■□□□□ 0.05
DDX54-204ENST00000546898 PIEZO2Q9H5I5 2752 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 FAM187AA6NFU0 413 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 C21orf140B9A014 251 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 TMEM150CB9EJG8 249 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 EIF3FO00303 357 aaPredicted RBP15.34■□□□□ 0.05
DDX54-204ENST00000546898 TERTO14746 1132 aaKnown RBP15.34■□□□□ 0.05
DDX54-204ENST00000546898 BANF1O75531 89 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 ENO3P13929 434 aaPredicted RBP15.34■□□□□ 0.05
DDX54-204ENST00000546898 DLSTP36957 453 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 BDKRB1P46663 353 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 MPP1Q00013 466 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 ZNF549Q6P9A3 640 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 SYT10Q6XYQ8 523 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 CDHR3Q6ZTQ4 885 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 MAATS1Q7Z4T9 603 aa15.34■□□□□ 0.05
DDX54-204ENST00000546898 GALNT7Q86SF2 657 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms