RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 NLE1Q9NVX2 485 aaPredicted RBP12.28□□□□□ -0.44
COL4A6-209ENST00000545689 STOML2Q9UJZ1 356 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 A0A1W2PP18 115 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PLOD3O60568 738 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 F2P00734 622 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 NT5EP21589 574 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 DDI2Q5TDH0 399 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 GDPD4Q6W3E5 623 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 ANKRD46Q86W74 232 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 OSTM1Q86WC4 334 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 CILP2Q8IUL8 1156 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 NUS1Q96E22 293 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF570Q96NI8 536 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 PEBP4Q96S96 227 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 TCHHQ07283 1943 aa12.28□□□□□ -0.44
COL4A6-209ENST00000545689 C9JVG2 144 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 XKRYO14609 159 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 EBLN1P0CF75 366 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 STC1P52823 247 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 FRMD7Q6ZUT3 714 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 NUDT13Q86X67 352 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 GLIS1Q8NBF1 620 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 TRIB3Q96RU7 358 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 WRAP53Q9BUR4 548 aaKnown RBP12.27□□□□□ -0.44
COL4A6-209ENST00000545689 C1QTNF1Q9BXJ1 281 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 FARSBQ9NSD9 589 aaKnown RBP12.27□□□□□ -0.44
COL4A6-209ENST00000545689 GIN1Q9NXP7 522 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 FLRT1Q9NZU1 646 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 LRRC72A6NJI9 287 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 DUXAA6NLW8 204 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 HAS3O00219 553 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 REM1O75628 298 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 RNASEH2AO75792 299 aaKnown RBP12.27□□□□□ -0.44
COL4A6-209ENST00000545689 GSTM3P21266 225 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 FCHO2Q0JRZ9 810 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 IQCCQ4KMZ1 466 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 ZNF783Q6ZMS7 281 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 PARP8Q8N3A8 854 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 KREMEN2Q8NCW0 462 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 GEMIN6Q8WXD5 167 aaKnown RBP12.27□□□□□ -0.44
COL4A6-209ENST00000545689 PAK6Q9NQU5 681 aaPredicted RBP12.27□□□□□ -0.44
COL4A6-209ENST00000545689 IL36AQ9UHA7 158 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 LRRC42Q9Y546 428 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 YIPF1Q9Y548 306 aa12.27□□□□□ -0.44
COL4A6-209ENST00000545689 FAM92AA1XBS5 289 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 WNT9AO14904 365 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 PRAMEF11O60813 436 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 TOP3BO95985 862 aaKnown RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 SERPINA3P01011 423 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 VIPR1P32241 457 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 NOVP48745 357 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CCNHP51946 323 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 GSCP56915 257 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 ERVK-21P61565 698 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 TRPV3Q8NET8 790 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 ERLEC1Q96DZ1 483 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CLIP3Q96DZ5 547 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 SLC2A13Q96QE2 648 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 RANBP9Q96S59 729 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CHCHD6Q9BRQ6 235 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CCM2Q9BSQ5 444 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 PCDHAC1Q9H158 963 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 ABCB8Q9NUT2 735 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 A0A1W2PRB8 838 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 MAGEB3O15480 346 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 B3GALT2O43825 422 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 MT-ND1P03886 318 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CCR8P51685 355 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 EMX2Q04743 252 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 ILF3Q12906 894 aaKnown RBP eCLIP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 TMEM198Q66K66 360 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 GPR135Q8IZ08 494 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 OR52J3Q8NH60 311 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 SLC9A6Q92581 669 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 RDH12Q96NR8 316 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 RSPH9Q9H1X1 276 aaPredicted RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 FAM120CQ9NX05 1096 aaKnown RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 PDCD5O14737 125 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 NIPSNAP2O75323 286 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 ALPPP05187 535 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 C8AP07357 584 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 S100A1P23297 94 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 S100GP29377 79 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 HSPB3Q12988 150 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CCNIQ14094 377 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 FBXO48Q5FWF7 155 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 LCN9Q8WX39 176 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 ZNF354BQ96LW1 612 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 CEP295NLQ96MC4 621 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 SMOQ99835 787 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 DNAAF2Q9NVR5 837 aaKnown RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 TRNAU1APQ9NX07 287 aaKnown RBP12.27□□□□□ -0.45
COL4A6-209ENST00000545689 SCN11AQ9UI33 1791 aa12.27□□□□□ -0.45
COL4A6-209ENST00000545689 PPEF2O14830 753 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 DLDP09622 509 aaKnown RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 PITRM1Q5JRX3 1037 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 C10orf62Q5T681 223 aaPredicted RBP12.26□□□□□ -0.45
COL4A6-209ENST00000545689 FRG2Q64ET8 278 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 HFE2Q6ZVN8 426 aa12.26□□□□□ -0.45
COL4A6-209ENST00000545689 PJA1Q8NG27 643 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms