RNA–Protein interactions for RNA: ENST00000544223.6

HCFC2-202, Transcript of host cell factor C2, humanhuman

TSL 2

Gene HCFC2, Length 2,538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-202ENST00000544223 CD207Q9UJ71 328 aa13.33□□□□□ -0.28
HCFC2-202ENST00000544223 NDRG2Q9UN36 371 aaKnown RBP13.33□□□□□ -0.28
HCFC2-202ENST00000544223 A0A1W2PQU0 124 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ASPDHA6ND91 283 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ANHXE9PGG2 379 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 NPC1O15118 1278 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 RNASEH1O60930 286 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 SNUPNO95149 360 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 VARSP26640 1264 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 MAP4P27816 1152 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 NTSR1P30989 418 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 HALP42357 657 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ZFP36L2P47974 494 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 STX1BP61266 288 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 CDK3Q00526 305 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ENPP2Q13822 863 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 STARD3Q14849 445 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 TIGD2Q4W5G0 525 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 IL23RQ5VWK5 629 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 FAM46CQ5VWP2 391 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 PGM2L1Q6PCE3 622 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 Q6ZS52 159 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 Q7L0L9 218 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 RGL4Q8IZJ4 473 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 MIER2Q8N344 545 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 KIAA1958Q8N8K9 716 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 SLC26A7Q8TE54 656 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 NRG4Q8WWG1 115 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 MTERF1Q99551 399 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ACAT2Q9BWD1 397 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 MRPL1Q9BYD6 325 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 EFCAB1Q9HAE3 211 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 RDH14Q9HBH5 336 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 MAP10Q9P2G4 905 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 PCDHGA7Q9Y5G6 932 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 MRASO14807 208 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 PSMG1O95456 288 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ANP32DO95626 131 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 C8GP07360 202 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 CYP2A7P20853 494 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 IMPA1P29218 277 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 PRDX6P30041 224 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 EIF2DP41214 584 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 LRP8Q14114 963 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ZNF658BQ4V348 819 aaPredicted RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 PAGE3Q5JUK9 113 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 KRTCAP2Q8N6L1 136 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 OR5AR1Q8NGP9 310 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 GFM2Q969S9 779 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 TRIM54Q9BYV2 358 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 STOX2Q9P2F5 926 aaPredicted RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 TDRKHQ9Y2W6 561 aaKnown RBP13.32□□□□□ -0.28
HCFC2-202ENST00000544223 CCL27Q9Y4X3 112 aa13.32□□□□□ -0.28
HCFC2-202ENST00000544223 ARHGAP10A1A4S6 786 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 NRP2O60462 931 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 ULK1O75385 1050 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 CIB2O75838 187 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 AP2A2O94973 939 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 BAG2O95816 211 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 GSTM1P09488 218 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 PRR35P0CG20 571 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 BMP8BP34820 402 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 SLC6A12P48065 614 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 GSTM4Q03013 218 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 LRRC36Q1X8D7 754 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 WASHC2DQ5SRD0 308 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 AGTRAPQ6RW13 159 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 MTSS1LQ765P7 747 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 ACPTQ9BZG2 426 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 ACTL8Q9H568 366 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 NFKBIL1Q9UBC1 381 aaPredicted RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 EPS15L1Q9UBC2 864 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 USP22Q9UPT9 525 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 PABPN1LA6NDY0 278 aaKnown RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 SHISA7A6NL88 538 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 EIF4E1BA6NMX2 242 aaKnown RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 MANBAO00462 879 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 PSIP1O75475 530 aaKnown RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 CLDN9O95484 217 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 ACSL1P33121 698 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 MTTPP55157 894 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 ACTR3P61158 418 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 PSME3P61289 254 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 DPTQ07507 201 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 CHIT1Q13231 466 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 ZRSR2Q15696 482 aaKnown RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 KIAA1324Q6UXG2 1013 aaKnown RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 RNF111Q6ZNA4 994 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 THOC6Q86W42 341 aaKnown RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 PROKR1Q8TCW9 393 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 MMADHCQ9H3L0 296 aaPredicted RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 OSGEPL1Q9H4B0 414 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 SDR39U1Q9NRG7 319 aaPredicted RBP13.31□□□□□ -0.28
HCFC2-202ENST00000544223 KCNK6Q9Y257 313 aa13.31□□□□□ -0.28
HCFC2-202ENST00000544223 POM121BA6NF01 834 aa13.3□□□□□ -0.28
HCFC2-202ENST00000544223 SEC22BO75396 215 aa13.3□□□□□ -0.28
HCFC2-202ENST00000544223 LRATO95237 230 aa13.3□□□□□ -0.28
HCFC2-202ENST00000544223 C1orf105O95561 183 aa13.3□□□□□ -0.28
HCFC2-202ENST00000544223 MPC1LP0DKB6 136 aa13.3□□□□□ -0.28
HCFC2-202ENST00000544223 ACP5P13686 325 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms