RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 DYDC1Q8WWB3 177 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 PATE1Q8WXA2 126 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 CCDC138Q96M89 665 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 CAMK1GQ96NX5 476 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 GPR78Q96P69 363 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 ATOH8Q96SQ7 321 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 SLC38A3Q99624 504 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 KIR3DX1Q9H7L2 352 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 ZNF624Q9P2J8 865 aaPredicted RBP11.57□□□□□ -0.56
DDB1-223ENST00000543658 SLC17A7Q9P2U7 560 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 IKZF3Q9UKT9 509 aa11.57□□□□□ -0.56
DDB1-223ENST00000543658 COL5A1P20908 1838 aaPredicted RBP11.57□□□□□ -0.56
DDB1-223ENST00000543658 PROB1E7EW31 1015 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 MYO1CO00159 1063 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 NOBOXO60393 691 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 CPA3P15088 417 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 ATP5F1P24539 256 aaPredicted RBP11.56□□□□□ -0.56
DDB1-223ENST00000543658 SHMT2P34897 504 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 FASLGP48023 281 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 HNMTP50135 292 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 UBE2IP63279 158 aaKnown RBP11.56□□□□□ -0.56
DDB1-223ENST00000543658 NHLH1Q02575 133 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 SLC14A1Q13336 389 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 PPP1R3AQ16821 1122 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.56□□□□□ -0.56
DDB1-223ENST00000543658 CDKL4Q5MAI5 379 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 SULT1C3Q6IMI6 304 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 OGFOD3Q6PK18 319 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 ARL14Q8N4G2 192 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 GPR156Q8NFN8 814 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 OR52E1Q8NGJ3 308 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 FAM76AQ8TAV0 307 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 LCN9Q8WX39 176 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 PKP4Q99569 1192 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 CIDEBQ9UHD4 219 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 PLAGL1Q9UM63 463 aa11.56□□□□□ -0.56
DDB1-223ENST00000543658 GOLGA4Q13439 2230 aaKnown RBP11.56□□□□□ -0.56
DDB1-223ENST00000543658 H3BQF6 201 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 SIGLEC6O43699 453 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 IPO13O94829 963 aaKnown RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 GLB1P16278 677 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 CCND1P24385 295 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 OAS2P29728 719 aaKnown RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 RAB28P51157 221 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 SLC18A1P54219 525 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PNLIPRP1P54315 467 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ALDH18A1P54886 795 aaKnown RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 PRKAA1Q13131 559 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 GPR18Q14330 331 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ARHGAP19Q14CB8 494 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PFKFB4Q16877 469 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 THEMIS2Q5TEJ8 643 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ANKS6Q68DC2 871 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ARMC6Q6NXE6 501 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 KLHL35Q6PF15 583 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ZYG11AQ6WRX3 759 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 MBOAT1Q6ZNC8 495 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 TMEM26Q6ZUK4 368 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 KANSL1Q7Z3B3 1105 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 OOSP2Q86WS3 158 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 SLC35F3Q8IY50 421 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PTGR2Q8N8N7 351 aaPredicted RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 PDPRQ8NCN5 879 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PPP4R1Q8TF05 950 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 NAT6Q93015 286 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 FBXL8Q96CD0 374 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PHF21BQ96EK2 531 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 MED8Q96G25 268 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 AHCYL2Q96HN2 611 aaKnown RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 APOLD1Q96LR9 279 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 C12orf65Q9H3J6 166 aaKnown RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 SRMSQ9H3Y6 488 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 SLC40A1Q9NP59 571 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 MLXIPLQ9NP71 852 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PARD6AQ9NPB6 346 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ABCF3Q9NUQ8 709 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 STOX2Q9P2F5 926 aaPredicted RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 LRIT1Q9P2V4 623 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 COPG2Q9UBF2 871 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 FTSJ1Q9UET6 329 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 EMCNQ9ULC0 261 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 PADI4Q9UM07 663 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 ANGPTL3Q9Y5C1 460 aa11.55□□□□□ -0.56
DDB1-223ENST00000543658 TNPO3Q9Y5L0 923 aaKnown RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 ARID1BQ8NFD5 2236 aaPredicted RBP11.55□□□□□ -0.56
DDB1-223ENST00000543658 WDFY4Q6ZS81 3184 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 CPED1A4D0V7 1026 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 FAM221BA6H8Z2 402 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 LILRA5A6NI73 299 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 A8MT66 165 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 NUDT21O43809 227 aaKnown RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 CCNT2O60583 730 aaKnown RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 H2AFYO75367 372 aaKnown RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 LDOC1O95751 146 aaPredicted RBP11.54□□□□□ -0.56
DDB1-223ENST00000543658 SLC16A8O95907 504 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 AMD1P17707 334 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 IMPA1P29218 277 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 PKLRP30613 574 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 SERPINB4P48594 390 aa11.54□□□□□ -0.56
DDB1-223ENST00000543658 ATP1A2P50993 1020 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms