RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 DNAJB6O75190 326 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 UGT2B17O75795 530 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 OAZ2O95190 189 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SERPINA6P08185 405 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PDHA2P29803 388 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 AQP1P29972 269 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CYP4F3Q08477 520 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 HSPB3Q12988 150 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 DHCR24Q15392 516 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF783Q6ZMS7 281 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ARHGAP36Q6ZRI8 547 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ABHD13Q7L211 337 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TAS1R3Q7RTX0 852 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 DRAXINQ8NBI3 349 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TEX47Q8TBZ9 253 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PLEKHO2Q8TD55 490 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 DENND1AQ8TEH3 1009 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TUBGCP5Q96RT8 1024 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 AGAP2Q99490 1192 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ADAM7Q9H2U9 754 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PRDM8Q9NQV8 689 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TBC1D23Q9NUY8 699 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZDHHC7Q9NXF8 308 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SALL4Q9UJQ4 1053 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 C3orf18Q9UK00 162 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 RUVBL1Q9Y265 456 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MBLAC1A4D2B0 266 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 BBIP1A8MTZ0 92 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM25AB3EWG3 89 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM25CB3EWG5 89 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FAM25GB3EWG6 89 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PTGES3LE9PB15 166 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TRIM38O00635 465 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SULT1B1O43704 296 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PRPS2P11908 318 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MSR1P21757 451 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 HOXA11P31270 313 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 GSTM5P46439 218 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF33AQ06730 810 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TAZQ16635 292 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF805Q5CZA5 627 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CCDC116Q8IYX3 515 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ESX1Q8N693 406 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 Q8N9G6 341 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PNPT1Q8TCS8 783 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 RORBQ92753 470 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ESAMQ96AP7 390 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NELL2Q99435 816 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NUSAP1Q9BXS6 441 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SEMA6AQ9H2E6 1030 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 KCNN2Q9H2S1 579 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 WDR55Q9H6Y2 383 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CHMP1AQ9HD42 196 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CALML5Q9NZT1 146 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NPIPA7E9PJI5 369 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 BOLA2-SMG1P6H3BVE0 249 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NRP2O60462 931 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SOCS5O75159 536 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FBXO24O75426 580 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 LEFTY1O75610 366 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 IFNGP01579 166 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 IL6P05231 212 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NPIPA8P0DM63 369 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NTSR1P30989 418 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 HNF1BP35680 557 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 HNMTP50135 292 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NRG3P56975 720 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ARF5P84085 180 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 GALNT2Q10471 571 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TTMPQ5BVD1 217 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ARL13AQ5H913 290 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 Q6ZVL8 140 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NUDT13Q86X67 352 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF527Q8NB42 609 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 TOR1AIP2Q8NFQ8 470 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC35B2Q8TB61 432 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 HCAR2Q8TDS4 363 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 C1orf74Q96LT6 269 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MTERF1Q99551 399 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 XYLT2Q9H1B5 865 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SEPSECSQ9HD40 501 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 BATF3Q9NR55 127 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 MRPL39Q9NYK5 338 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 C2orf78A6NCI8 922 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CST5P28325 142 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 SLC7A2P52569 658 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CORO7P57737 925 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 DEFB103AP81534 67 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 LMAN2Q12907 356 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 PAFAH1B3Q15102 231 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZBTB6Q15916 424 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZNF674Q2M3X9 581 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 CLEC6AQ6EIG7 209 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 ZC3H14Q6PJT7 736 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 NAPRTQ6XQN6 538 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 BNIPLQ7Z465 357 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 FSTL5Q8N475 847 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 COX18Q8N8Q8 333 aa6.76□□□□□ -1.33
SRGAP1-206ENST00000543397 VANGL1Q8TAA9 524 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms