RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 BBS2Q9BXC9 721 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 KCNH6Q9H252 994 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 FAM83DQ9H4H8 585 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ZDHHC6Q9H6R6 413 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 MAGIXQ9H6Y5 334 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 RMND5AQ9H871 391 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ZNF490Q9ULM2 529 aaPredicted RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 FNDC3AQ9Y2H6 1198 aaKnown RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 SLC27A6Q9Y2P4 619 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 A0A096LPI6 279 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 TRBV5-3A0A0A0MS03 114 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ARHGAP10A1A4S6 786 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 FAM220BPB1ANY3 271 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 H0YAE9 185 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 TIPRLO75663 272 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 H6PDO95479 791 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 LDLRP01130 860 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 RAP2AP10114 183 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 SLC2A4P14672 509 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 FUT4P22083 530 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 BMPR1AP36894 532 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CTSOP43234 321 aaPredicted RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 STK19P49842 368 aaPredicted RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 LRRC74AQ0VAA2 488 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 E2F2Q14209 437 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CYP51A1Q16850 503 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 HENMT1Q5T8I9 393 aaKnown RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 FAM117BQ6P1L5 589 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ARMCX6Q7L4S7 300 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CYP2U1Q7Z449 544 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 NLRP8Q86W28 1048 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 RIMKLAQ8IXN7 391 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CLDN19Q8N6F1 224 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 SNX31Q8N9S9 440 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ZBTB8BQ8NAP8 495 aaPredicted RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 DNAJB14Q8TBM8 379 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CSGALNACT1Q8TDX6 532 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 ADAMTS16Q8TE57 1224 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CNBD2Q96M20 576 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 CDK15Q96Q40 435 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 TCF25Q9BQ70 676 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 APOL5Q9BWW9 433 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 OSBPL10Q9BXB5 764 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 DNAJC11Q9NVH1 559 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 DUS2Q9NX74 493 aaKnown RBP9.64□□□□□ -0.87
SS18-205ENST00000542420 ARL15Q9NXU5 204 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 DMTF1Q9Y222 760 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 MYRFQ9Y2G1 1151 aa9.64□□□□□ -0.87
SS18-205ENST00000542420 A0A0J9YVX5 310 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 LOC730098B7Z3J9 87 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 C5orf67F2Z3F1 127 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 H3BNH8 94 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 GPR39O43194 453 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 HOXC11O43248 304 aaPredicted RBP9.63□□□□□ -0.87
SS18-205ENST00000542420 DEAF1O75398 565 aaPredicted RBP9.63□□□□□ -0.87
SS18-205ENST00000542420 GUCA1CO95843 209 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 UGT2B4P06133 528 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 RETP07949 1114 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 TYRP14679 529 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 ZNF23P17027 643 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 NRIP1P48552 1158 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 RPL38P63173 70 aaKnown RBP9.63□□□□□ -0.87
SS18-205ENST00000542420 MAPKAPK3Q16644 382 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 RFTN2Q52LD8 501 aaPredicted RBP9.63□□□□□ -0.87
SS18-205ENST00000542420 RUNDC3AQ59EK9 446 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 ZNF805Q5CZA5 627 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 C6orf52Q5T4I8 152 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 NECAB2Q7Z6G3 386 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 TMEM25Q86YD3 366 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 RGL4Q8IZJ4 473 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 PGBD3Q8N328 593 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 GALNT4Q8N4A0 578 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 NAT14Q8WUY8 206 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 GTF2H4Q92759 462 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 ESAMQ96AP7 390 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 TBC1D20Q96BZ9 403 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 MRGPRX3Q96LB0 322 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 RAD9AQ99638 391 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 ACTR8Q9H981 624 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 IL1RL2Q9HB29 575 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 GPRC5BQ9NZH0 403 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 PTTG2Q9NZH5 202 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 KLQ9UEF7 1012 aa9.63□□□□□ -0.87
SS18-205ENST00000542420 NEDD8-MDP1E9PL57 170 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 PER2O15055 1255 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 INPP4BO15327 924 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 CCL16O15467 120 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 PSIP1O75475 530 aaKnown RBP9.62□□□□□ -0.87
SS18-205ENST00000542420 BMP10O95393 424 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 FGBP02675 491 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 TFAP2AP05549 437 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 RB1P06400 928 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 RHOP08100 348 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 JUPP14923 745 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 HRH2P25021 359 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 GKP32189 559 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 ARL1P40616 181 aaPredicted RBP9.62□□□□□ -0.87
SS18-205ENST00000542420 CCR2P41597 374 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 GRIA2P42262 883 aa9.62□□□□□ -0.87
SS18-205ENST00000542420 TRPC1P48995 793 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms