RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 PLA2G4EQ3MJ16 856 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 VWA5B1Q5TIE3 1220 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 XKR5Q6UX68 686 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 ASCL5Q7RTU5 278 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 RASGRP3Q8IV61 690 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 OR2L2Q8NH16 312 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 CCT6BQ92526 530 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 RHBDF1Q96CC6 855 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 ELF4Q99607 663 aaPredicted RBP27.08■■□□□ 1.93
CCM2-218ENST00000541586 IL21RQ9HBE5 538 aa27.08■■□□□ 1.93
CCM2-218ENST00000541586 TNPO3Q9Y5L0 923 aaKnown RBP27.08■■□□□ 1.93
CCM2-218ENST00000541586 TDRD6O60522 2096 aaKnown RBP27.08■■□□□ 1.93
CCM2-218ENST00000541586 PPP6CO00743 305 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 HDAC3O15379 428 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 TAPBPO15533 448 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 GRID2O43424 1007 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 HNRNPH2P55795 449 aaKnown RBP27.07■■□□□ 1.92
CCM2-218ENST00000541586 ARHGAP8P85298 464 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 ABRQ12979 859 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 PCBP2Q15366 365 aaKnown RBP eCLIP27.07■■□□□ 1.928e-6■■■■□ 24
CCM2-218ENST00000541586 SULT1C3Q6IMI6 304 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 IL27RAQ6UWB1 636 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 MBOAT1Q6ZNC8 495 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 LRRTM4Q86VH4 590 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 GALNT13Q8IUC8 556 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 PHACTR4Q8IZ21 702 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 TRPC4APQ8TEL6 797 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 LRRC37BQ96QE4 947 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 STN1Q9H668 368 aaKnown RBP27.07■■□□□ 1.92
CCM2-218ENST00000541586 MGAT4DA6NG13 374 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 SLCO1B7G3V0H7 640 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 E2F3O00716 465 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 SDC3O75056 442 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 CSF2P04141 144 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 CTSEP14091 401 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 IDH3AP50213 366 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 BLKP51451 505 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 SH3BP2P78314 561 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 LCP2Q13094 533 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 CHST15Q7LFX5 561 aaPredicted RBP27.07■■□□□ 1.92
CCM2-218ENST00000541586 HM13Q8TCT9 377 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 MAPK15Q8TD08 544 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 TRIM54Q9BYV2 358 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 ZDHHC5Q9C0B5 715 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 ERVMER34-1Q9H9K5 563 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 ZBTB26Q9HCK0 441 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 SEMA4BQ9NPR2 832 aaPredicted RBP27.07■■□□□ 1.92
CCM2-218ENST00000541586 TM7SF3Q9NS93 570 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 ARL15Q9NXU5 204 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 VTI1BQ9UEU0 232 aa27.07■■□□□ 1.92
CCM2-218ENST00000541586 APOBEC3BQ9UH17 382 aaKnown RBP27.07■■□□□ 1.92
CCM2-218ENST00000541586 LNP1A1A4G5 178 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 GPR89AB7ZAQ6 455 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 GPR89BP0CG08 455 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 CYP2A7P20853 494 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 SERPINB3P29508 390 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 CDKL1Q00532 357 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 C1orf61Q13536 156 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 PRRT3Q5FWE3 981 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 CDKL4Q5MAI5 379 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 EPGNQ6UW88 154 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 MTDHQ86UE4 582 aaKnown RBP27.06■■□□□ 1.92
CCM2-218ENST00000541586 TMEM168Q9H0V1 697 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 PARD6AQ9NPB6 346 aa27.06■■□□□ 1.92
CCM2-218ENST00000541586 H3BM21 787 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 PSIP1O75475 530 aaKnown RBP27.05■■□□□ 1.92
CCM2-218ENST00000541586 ANXA5P08758 320 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 ARRB1P49407 418 aaPredicted RBP27.05■■□□□ 1.92
CCM2-218ENST00000541586 BNIP3Q12983 259 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 NFE2L1Q14494 772 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 PYCR3Q53H96 274 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 CCDC121Q6ZUS5 278 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 ALYREFQ86V81 257 aaKnown RBP27.05■■□□□ 1.92
CCM2-218ENST00000541586 CFAP61Q8NHU2 1237 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 RILPQ96NA2 401 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 TMEM79Q9BSE2 394 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 MID1IP1Q9NPA3 183 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 WWOXQ9NZC7 414 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 SLC23A2Q9UGH3 650 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 PLEKHM1Q9Y4G2 1056 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 DGKBQ9Y6T7 804 aa27.05■■□□□ 1.92
CCM2-218ENST00000541586 DIAPH2O60879 1101 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 HIST1H2AGP0C0S8 130 aaPredicted RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 NME1P15531 152 aaKnown RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 HIST1H2ADP20671 130 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 HSPA7P48741 367 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 HNRNPKP61978 463 aaKnown RBP eCLIP27.04■■□□□ 1.92
CCM2-218ENST00000541586 CSRP2Q16527 193 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 FAM83HQ6ZRV2 1179 aaPredicted RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 YTHDF3Q7Z739 585 aaKnown RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 AMZ2Q86W34 360 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 MCOLN3Q8TDD5 553 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 UBTD2Q8WUN7 234 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 SCARF2Q96GP6 870 aaPredicted RBP27.04■■□□□ 1.92
CCM2-218ENST00000541586 HIST1H2AHQ96KK5 128 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 HIST1H2AJQ99878 128 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 H2AFJQ9BTM1 129 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 HGH1Q9BTY7 390 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 MYLK2Q9H1R3 596 aa27.04■■□□□ 1.92
CCM2-218ENST00000541586 RMI1Q9H9A7 625 aa27.04■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms