RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ARSFP54793 590 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 NFATC2Q13469 925 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 LRRC73Q5JTD7 316 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 C6orf136Q5SQH8 315 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 Q6ZSR9 355 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 SERPINA9Q86WD7 417 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 OR2A12Q8NGT7 310 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 MRGPRX3Q96LB0 322 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 CSF3RQ99062 836 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 TUBA1CQ9BQE3 449 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 YTHDF1Q9BYJ9 559 aaKnown RBP16.79■□□□□ 0.28
SPIDR-227ENST00000541342 FANCEQ9HB96 536 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 VPS26AO75436 327 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 CRCPO75575 148 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 SEC14L2O76054 403 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 UROSP10746 265 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 CD9P21926 228 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 VIPR2P41587 438 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 ERVK-8P63133 956 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 RAD51Q06609 339 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 DHCR24Q15392 516 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 OSCP1Q8WVF1 389 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 SNX19Q92543 992 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 KCNJ9Q92806 393 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 OTUB2Q96DC9 234 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 ASIC4Q96FT7 647 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 SCRN2Q96FV2 425 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 CNDP2Q96KP4 475 aaKnown RBP16.79■□□□□ 0.28
SPIDR-227ENST00000541342 NUSAP1Q9BXS6 441 aaKnown RBP16.79■□□□□ 0.28
SPIDR-227ENST00000541342 ASB8Q9H765 288 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 PKD2L2Q9NZM6 624 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 ERVW-1Q9UQF0 538 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 PPIL1Q9Y3C6 166 aa16.79■□□□□ 0.28
SPIDR-227ENST00000541342 PFDN6O15212 129 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 POP4O95707 220 aaKnown RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ESR1P03372 595 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 LHCGRP22888 699 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CLCN7P51798 805 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 LRRC66Q68CR7 880 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 DCDC5Q6ZRR9 648 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ZFAND4Q86XD8 727 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 FAM86B1Q8N7N1 296 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 EEF1AKMT1Q8WVE0 214 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CDK15Q96Q40 435 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ST14Q9Y5Y6 855 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 KANSL1LA0AUZ9 987 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 E2F3O00716 465 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ZBTB11O95625 1053 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CYP17A1P05093 508 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 NRIP1P48552 1158 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CD97P48960 835 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 MTPNP58546 118 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 PTSQ03393 145 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 DMC1Q14565 340 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 SNX20Q7Z614 316 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 C12orf40Q86WS4 652 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CELF5Q8N6W0 485 aaKnown RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 GPR26Q8NDV2 337 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ST13P5Q8NFI4 369 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 OR52B6Q8NGF0 335 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 FRS2Q8WU20 508 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TMBIM1Q969X1 311 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 MCCC1Q96RQ3 725 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 C19orf43Q9BQ61 176 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TBC1D23Q9NUY8 699 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TMEM9Q9P0T7 183 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 DPP7Q9UHL4 492 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ZMYM5Q9UJ78 669 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TRMT6Q9UJA5 497 aaKnown RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 SPTBN5Q9NRC6 3674 aaKnown RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TRBV5-4A0A0C4DH59 114 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 FAM234BA2RU67 622 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TTC34A8MYJ7 566 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 BTN3A1O00481 513 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 STX16O14662 325 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 SNX2O60749 519 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CDH1P12830 882 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 JUNBP17275 347 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 CHRNA6Q15825 494 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 AASDHQ4L235 1098 aaPredicted RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 GLYATQ6IB77 296 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 RFLNAQ6ZTI6 216 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TPRG1Q6ZUI0 275 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 HID1Q8IV36 788 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 STK40Q8N2I9 435 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 TERB1Q8NA31 727 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 BDH2Q9BUT1 245 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 ZIM2Q9NZV7 527 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 EIF2B4Q9UI10 523 aaKnown RBP16.78■□□□□ 0.28
SPIDR-227ENST00000541342 FBXO10Q9UK96 956 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 PCDHB3Q9Y5E6 796 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 PRSS21Q9Y6M0 314 aa16.78■□□□□ 0.28
SPIDR-227ENST00000541342 GLYATL1P3A0A0U1RQE8 302 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 GOLGA8CPA6NN73 597 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 J3QRK9 145 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 RSL1D1O76021 490 aaKnown RBP16.77■□□□□ 0.28
SPIDR-227ENST00000541342 HTR1AP08908 422 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 PCNAP12004 261 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 ALDH3A2P51648 485 aa16.77■□□□□ 0.28
SPIDR-227ENST00000541342 PROSER1Q86XN7 944 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms